Pseudomonas bubulae: V6B39_00870
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Entry
V6B39_00870 CDS
T10711
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub03440
Homologous recombination
Brite
Enzymes [BR:
pbub01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V6B39_00870 (recB)
DNA repair and recombination proteins [BR:
pbub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6B39_00870 (recB)
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WWR38025
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Position
complement(210855..214544)
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AA seq
1229 aa
AA seq
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MSEQTLPLALAFPLRGSQLIEASAGTGKTFTISALYLRLILGHGGVESGFGRELLPPQIL
VVTFTDAATKELRDRIRTRLAEAARYFRGEIDAPDALVEELRDQFAPEQWAACAGRLDIA
AQWMDEAAVSTIHGWCQRMLREHAFDSGSLFTQTLETDHSDLLGEVLRDYWRLFCYPMHG
DALNWVRANWSGPAALMPRVRALFGSSRQPANAEQTPAQMIEACLLERRQALVQLKAPWL
QWAQELREICLQGVASKTVDGRKMQARYFEPWFEKLSAWAADEDQEQLDLGTGFTRLTPD
GMAEAWKGVAPQHPGLDAMPGLKAALDALPSPDAAVLQHAAHWVSVRFEEEKRRRAEMGF
DDMLLRLDSALQADGGDRLATLIREQFPVALIDEFQDTDPVQYRIFETIYRIEDNCPDTG
LFLIGDPKQAIYAFRGADIYTYLRARQATAGRLHTLDTNFRSSHAMVKAVNHVFERAELR
DSGRGAFLFREGSENPVPFVSVKSQGRKEVLQLDGQPVSALTLWQLPSEQPLSGAVYRQY
LAAACASQIVELLNGGQQGRCGFIKDGEALRGVLPADIAILVRDGKEAQAVRRELSSRGV
RSVYLSDKDSVYAAQEAHDVLAWLKACAEPDVERPLRAALACITLDLPLVELERLNQDEL
AWERRVMQFRGYRETWRKQGVLAMLRRLLHDFELPQALIARPDGERVLTNVLHLSELLQQ
AAAELDGEQALIRHLAEHLALSGQAGEEQILRLESDEQLVKVVTIHKSKGLEYPLVFLPF
ICSAKPVDGSRLPLHFHDAAGNAQVSLKPTPELIAQADDERLAEDLRLLYVALTRARHAC
WLGVADLKRGNSNRSVLHLCALGYLLGGGAMLAESAGLQSWLAEVQQGCDALQCEPVPAA
DAAHFYPPLNQATLLEPLIPGRRAAENWWIASYSALRIGDSLSPAEAPESALAQKLSDDE
RLDPEAPREVLLSGGDIHRFPRGPNPGTFLHGLLEWAGSEGFKADPEAIKDAVARRCNRR
GWQGWIETLSDWLQHLQDEPLRLNNGQPAVVLSELSQYQIEMEFWFASHKVDVVQMDTLV
RQHTHGGAARAGAEPSLLNGMFKGFIDLTFEHQGRYYVADYKSNWLGTDDSAYTEQAMTA
SILDNRYDLQYVLYLLALHRQLKARLPGYDYDQHMGGALYLFLRGTRAQGQGVFFTRPPR
LLIESLDLMFQGKPLPKTAEPAWEQGVLL
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcaaacattaccgctggccctggcatttcccctgcgcggtagccaattgatc
gaggccagtgcaggcaccggtaaaaccttcacgatctcggcactctacctgcgcctgatt
ttggggcatggcggcgtagaatcgggttttggccgtgagctattaccaccgcaaattctc
gtggtgacctttactgatgctgccaccaaagaactgcgcgaccgcatccgtacccgcctg
gcagaagccgcacgctattttcgtggcgagatcgacgcgccggatgccttggtcgaagaa
ctgcgtgaccagtttgctcccgaacagtgggctgcttgcgccgggcgtctggatatcgcc
gcccaatggatggacgaggctgcggtctcgaccattcacggttggtgccagcgcatgttg
cgcgagcacgctttcgatagcggcagcctgtttacccagaccctggaaaccgatcacagc
gacttgctgggcgaagtgctgcgcgattactggcggctgttttgctaccccatgcacggc
gacgcgctgaactgggtgcgtgccaactggagcggccccgccgccttgatgccgcgcgtg
cgagcgttgtttggtagctcgcgccagccagccaatgctgaacaaacgcctgcacaaatg
atcgaggcctgcttgctggagcgccgccaggcattggtgcagctcaaagccccctggttg
caatgggctcaagagctgcgtgagatctgcctgcagggcgtggccagcaaaacggtcgac
ggtcgtaaaatgcaggcccggtattttgaaccctggtttgaaaagctcagcgcctgggcg
gctgacgaagatcaggagcagcttgatctgggtaccggcttcacgcgtctgactcccgac
ggtatggccgaagcctggaaaggcgttgccccgcagcatccgggcctggatgccatgccc
ggcctcaaggccgcgctcgatgccttgccgagcccggacgccgccgtgctgcagcatgcg
gcgcactgggtgagtgtgcgttttgaagaagaaaaacgccgccgtgccgaaatgggtttc
gacgatatgctactgcgcctggactcggcattgcaggccgatggcggtgatcgcctggcg
accctgattcgtgaacagttccccgtggcgctgatcgatgagttccaggacacagacccc
gtgcagtaccgtatcttcgagaccatctaccggattgaagacaattgcccagacaccggg
ctgtttttgattggcgacccgaaacaggctatctatgcctttcgcggggcggatatctac
acctacttgcgcgcacgtcaggcgactgcagggcgcttgcacacgctggataccaacttc
cgctccagtcacgccatggtcaaggcagtcaatcatgtctttgagcgggcggagctgcgc
gatagcggacgtggtgcatttttgttccgcgagggttcagaaaaccccgtgccctttgtt
tcggttaaatcccaagggcgtaaggaagtcctgcagcttgatggccagcctgtcagcgcc
ctgacgctctggcaattgccctccgagcaaccgctgtcgggtgctgtgtatcgtcagtat
ctggcggccgcctgtgccagccagattgtcgagctgcttaatggtggccagcaagggcgc
tgcggttttatcaaggacggcgaagcactgcgtggcgtattacctgccgacatcgcgatt
ctcgtgcgtgacggcaaggaagctcaggccgtgcggagagaattatcgagccgtggtgtg
cgaagcgtttacctgtcggataaggattcggtgtacgccgcgcaggaagcacatgatgtg
ctggcctggctcaaggcctgcgccgagcctgacgtcgagcgcccactgcgtgccgcattg
gcctgtatcaccctggacttgccgctggttgagctggagcgtctgaaccaggacgaactg
gcctgggaaagacgtgttatgcagttccgcggttaccgcgaaacctggcgcaagcaaggg
gtactcgccatgttgcgtcgtctgctgcatgactttgaactgccccaggccctgattgcc
cgccccgatggcgagcgcgttctgaccaacgtcttgcacttgtccgaattgttgcagcaa
gccgcagccgagctggacggtgagcaggcgcttatccgtcatctggccgagcacctggcc
ttgtccggccaggcgggtgaagaacagatcctgcgcctggaaagtgacgagcaactggtc
aaggtggtgactatccacaagtccaaggggctggagtacccgttggtgtttttgccgttt
atctgctccgcaaaaccggtggatggcagtcgtctgccgctgcacttccacgatgctgcg
ggcaacgcccaggtcagtttgaaaccgacgccagagctgattgcccaggccgatgacgag
cgtctggccgaagacctgcgcttgctgtacgtagccctgacccgtgcccggcatgcgtgt
tggctgggggttgccgacctcaagcgcggcaatagcaatcgctcggtcttgcacctctgc
gccctgggttatttgctgggtggtggtgccatgctggccgagtcggcgggcttgcagagc
tggttggccgaggtgcagcaaggttgcgacgccttgcagtgcgaacccgttccagctgct
gacgcggcgcatttttatccaccgctcaaccaggcaaccttgcttgagccgctgatcccg
ggccgccgcgccgctgaaaactggtggatcgcttcctatagcgcactgcgcattggtgac
agcctcagcccggccgaagcacctgaaagtgccttggcgcaaaagctctcggatgatgag
cgcctcgaccctgaggcaccgcgtgaagtgttgctcagtgggggtgatattcaccgcttc
ccccgtgggccaaatcccgggacttttctccatggcctgcttgagtgggcgggcagcgaa
ggcttcaaggccgaccccgaagcgatcaaggacgctgtagcacggcgctgcaaccggcgt
ggctggcaaggctggatcgagaccttgagtgactggctgcagcatctgcaagatgaaccg
ctgcgtctgaataatggtcagcccgctgtggtcttgagtgagttgagccagtaccagatt
gaaatggaattctggtttgccagccacaaggtcgatgttgtgcagatggacacactggtg
cgtcagcatacccacggtggcgccgcgcgggcgggggccgagccgagcctgctcaatggc
atgttcaagggctttatcgacctgaccttcgagcatcaggggcgttattacgtggcggac
tacaaatccaactggctgggtaccgatgattcggcctacaccgagcaggcgatgaccgcc
tccattctggacaaccgctacgacctgcaatatgtcctgtatttgttggctttgcatcgt
cagctcaaggctcgattgcccggctatgactacgaccagcatatgggcggcgcactgtat
ctgtttttgcgtggtacccgcgcccagggacagggcgtgtttttcacccgcccgcccaga
ctattgatcgaaagcctggacctgatgttccagggcaaaccgctgccgaaaacagctgaa
ccggcgtgggaacagggagtgttgttatga
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