Pseudomonas bubulae: V6B39_01965
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Entry
V6B39_01965 CDS
T10711
Symbol
waaF
Name
(GenBank) lipopolysaccharide heptosyltransferase II
KO
K02843
lipopolysaccharide heptosyltransferase II [EC:
2.4.99.24
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00540
Lipopolysaccharide biosynthesis
pbub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
V6B39_01965 (waaF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbub01005
]
V6B39_01965 (waaF)
Enzymes [BR:
pbub01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.24 lipopolysaccharide heptosyltransferase II
V6B39_01965 (waaF)
Lipopolysaccharide biosynthesis proteins [BR:
pbub01005
]
Core region
V6B39_01965 (waaF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
PS_pyruv_trans
Motif
Other DBs
NCBI-ProteinID:
WWR38227
LinkDB
All DBs
Position
complement(478148..479182)
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AA seq
344 aa
AA seq
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MNILIVGPSWVGDMVMAQTLFQCLKQRHPQCEIDVLAPEWSRPILERMPEVRKALSFPLG
HGALELATRRKIGKSLKGQYDQAILLPNSLKSALVPFFAGIPKRTGWRGEFRYGLLNDVR
KLDKERYPLMIERFMALAYEPGADLPKPYPRPDLQIDPQSRAGALAKFGLELDRPVLALC
PGAEFGESKRWPSEHYAKVAEQKIREGWQVWLFGSKNDHGVGEDIRSRLIPGLREESVNL
SGETSLAEAIDLLSCADAVVSNDSGLMHVAAALNRPLVAVYGSTSPGFTPPLADKVEIVR
LGLDCSPCFDRTCRFGHYNCLRELMPQPVIEALQRLQGSPVEVN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgatcgttgggcccagctgggtcggtgacatggtgatggcgcagacactg
ttccagtgcctcaagcagcgccacccgcagtgcgaaatcgatgtgctggctcccgagtgg
agccggcccatccttgagcgcatgcctgaagttcgcaaggccttgagcttcccgctcggc
cacggcgcgcttgaactggccacgcgacgcaagatcggcaagtccctcaagggccaatac
gatcaggcaatcttgttgcccaactcgcttaaatcggccctggtgccattttttgcgggt
attcccaaacgtaccggctggcgcggcgagttccgctacggcctgctcaacgatgtgcgc
aagctcgacaaagagcgctacccgctgatgatcgagcgctttatggccctggcctatgag
cctggggccgacctgcccaagccgtacccgcgccctgatttgcagattgacccgcaaagc
cgtgccggcgcactggccaagttcggcctggagctggatcgtccggtgctggcgctgtgc
ccgggtgccgaatttggcgagtctaagcgctggccgtccgagcactacgccaaagttgcc
gaacaaaagatccgcgaaggttggcaagtgtggctgttcggctccaaaaacgatcacggg
gtaggcgaagatatccgttcgcgcctgatcccggggctgcgcgaagagtcggtcaacctc
agcggcgagacctcactggccgaagccatcgacctgttgtcctgtgcagatgccgtggta
tccaacgattccgggctgatgcatgtggccgctgcgctgaaccgcccgctggtggcggtc
tacggctccacttcgccaggttttaccccgcccttggcggacaaggtcgaaattgtgcgg
ctgggcctcgattgcagcccctgttttgaccgtacctgccgttttggccactacaattgc
ctgcgcgaactgatgccgcagccggtgattgaagccttgcagcgtctgcagggttcaccg
gtcgaggttaactag
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