KEGG   Pseudomonas bubulae: V6B39_02040
Entry
V6B39_02040       CDS       T10711                                 
Name
(GenBank) transcriptional regulator
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
pbub  Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:pbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:pbub03000]
    V6B39_02040
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pbub02048]
    V6B39_02040
Transcription factors [BR:pbub03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    V6B39_02040
Prokaryotic defense system [BR:pbub02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    V6B39_02040
SSDB
Motif
Pfam: HTH_3 HTH_31
Other DBs
NCBI-ProteinID: WWR38242
LinkDB
Position
complement(507984..508385)
AA seq 133 aa
MNALVEQAAEHWQFVAPLLRKPKNEADYDGLVAALDTLTDLIGDDETNPLMSLVDIIGDW
VEAYDLEHRPMPKVSGVDVLRSVMQEHGLTQSDLPGVGTQSVVSEILSGKRQLNVRQIRW
LADYFKVPVDMFI
NT seq 402 nt   +upstreamnt  +downstreamnt
atgaacgcattggtcgaacaggcagcagagcattggcaattcgtggcgccgctgctgcgc
aaaccgaaaaacgaagccgattacgacgggctggtcgccgcccttgatacgttgaccgac
ttgataggcgatgatgagaccaaccccttgatgagcctggtggacatcatcggtgactgg
gttgaggcttacgacctagagcatcgaccgatgcccaaggtcagcggcgtcgatgtgctg
cgctcggtgatgcaggaacacgggctgacgcaaagcgatttgccaggtgtcggcacccag
tctgtggtgtccgaaatcctcagcggtaaacgccagctcaacgtacggcagattcgctgg
ctggccgattacttcaaagtgcctgtggatatgtttatctga

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