Pseudomonas bubulae: V6B39_02230
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Entry
V6B39_02230 CDS
T10711
Symbol
gspD
Name
(GenBank) type II secretion system secretin GspD
KO
K02453
general secretion pathway protein D
Organism
pbub Pseudomonas bubulae
Pathway
pbub03070
Bacterial secretion system
Brite
Secretion system [BR:
pbub02044
]
Type II secretion system
General secretion pathway protein
V6B39_02230 (gspD)
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NCBI-ProteinID:
WWR38277
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Position
complement(539888..541801)
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AA seq
637 aa
AA seq
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MTKPGAFVFGPLFTCCVLCAGLLLQSPAWAQKQYWKLAMKEAELRDVVQEISSILGATVV
LDPRVQGRVTVISEKELDREGVRRLFYSVLDAHGFSVIDQGDRLLIIPAAEAKARAGSAD
AKAVEAEAFVTRVIELNGSVAADLAGLLRPLVSSSGYVGPSASANALIITDTAANTQRLV
EMVRQLDSGARSGHSVVVLKHGLASDIARIMEQALDKKDAGSNSRVIADTSTNRVVIIGN
ETARKRLSALARSLDAPGSIKQENSRVLRLRYGDAKQLAAVLESVSPGLKKDMALESSTQ
KASTREVMVAADESQNALVIMAEPAQVRTLENIVRELDQPRSQVLIHAAIVEVSGDIAKT
LGVQWGVNAGRGRGGITFPGTGIQIGALSQSNIKLPEGAVLQVGNDRFNVLVSALASDTN
NNVLSTPSLLTLDNQEAEILVGQNVPLKTGSYTGSGENAKNPFTTVTRQDIGISLKVKPH
INEGSLMRLEVAQENSEIAPSLQGVESTDLITNKRALKSTILAEDGEIIVIGGLIKDSVR
TQVSGVPLLKDIPYLGALFRWNKDTRTKTNLMVFLRPTIVRSKNDLREISESRYNALRKL
DESGPKGKSSRLLPDNAHQMFDTPTQDNRRPPEAGRP
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcccggtgccttcgttttcggccctctttttacctgttgtgtgctgtgcgca
gggttgctgttgcaatctccggcgtgggcccagaagcagtactggaaactggcgatgaaa
gaggccgaactgcgcgacgtcgtgcaggaaatatcatcgatactcggcgccaccgtggtt
cttgatcccagggttcagggccgggtcacggttatttccgaaaaagagctggaccgcgaa
ggcgtacgtcgcttgttttactctgtgctcgatgcccacggcttctcggtgattgaccaa
ggtgatcgtttactgatcatccctgccgccgaggcaaaagcacgggctggcagcgctgat
gcgaaagcggttgaggcagaggcctttgtcacacgggtcatcgaactgaatggcagcgtc
gcggccgatctggctggcctgttgcgaccactggtgtctagcagtggttacgtcgggcct
tctgcttcggccaacgcgctgatcattaccgacactgcagccaatacgcagcgccttgtc
gaaatggttcgccagctggattcaggtgcgcgttccggccattcggtggttgtgctcaaa
catggtctggccagcgacattgccaggatcatggagcaagcgctggacaaaaaggatgcg
ggttcgaacagtcgagtgatcgccgacacatcgaccaatcgcgtggtaatcattggcaac
gaaacagcgcgcaagcgcttgagtgcactggcccgctctctcgatgctccgggcagcatc
aagcaggaaaactcacgggtgctgcgtcttcgctatggcgatgccaagcaattggccgca
gtactggaatcagtaagcccgggtttgaaaaaggacatggccctggagagcagtacccag
aaagcatcaacccgcgaagtgatggtagcggcagatgaaagccagaacgcactggtgatc
atggctgagcctgcgcaggttcgtaccctggaaaatatcgtgcgcgaactggatcagccg
cgctcacaagtgttgatccatgccgctattgttgaagtttccggggatattgcgaaaacc
ctcggcgtgcaatggggtgtcaacgcaggcagaggcagaggcggtattaccttcccgggc
accggaattcaaattggtgcgttgtcccaaagtaatatcaaacttccagaaggtgccgtg
ctgcaggttggcaacgaccgtttcaacgtcctggtttcagcgttggccagcgataccaac
aacaatgtgttgtccacgccgagccttctgaccctggacaatcaggaagccgagatcctg
gtgggccaaaacgtgccgctcaaaactggctcctatacaggctctggtgaaaacgccaaa
aacccctttaccacggtgacgcgtcaggacatcggcatcagcctaaaggtcaagccgcat
atcaatgaaggcagcttgatgcgtctggaagttgcacaggaaaactccgagatagcccct
tcactgcagggtgtcgagtcaaccgatctgatcaccaataaacgcgccttgaaaagcacc
atcctggccgaagacggggaaatcatcgtgattggcgggctgatcaaggacagcgtgcga
acccaggtcagtggcgttcctttacttaaagacattccgtacctgggcgccctgtttcgc
tggaacaaagacacccgtaccaaaaccaacctgatggtttttttgcgtccgaccattgtg
cgcagcaagaatgatctgcgtgaaatcagcgaaagccgttacaacgctttgcgcaagctc
gatgagagcggtcccaagggcaaaagctcgcggttgttgcccgacaatgcacatcaaatg
ttcgatacccctacgcaagataaccgtcgcccacctgaagcaggtcgaccatga
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