Pseudomonas bubulae: V6B39_02320
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Entry
V6B39_02320 CDS
T10711
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V6B39_02320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbub03400
]
V6B39_02320
Enzymes [BR:
pbub01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6B39_02320
DNA repair and recombination proteins [BR:
pbub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V6B39_02320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA-like_WH
HypA
AAA_30
Zn_ribbon_6
DUF4796_N
iSirtuin
PIF1
RUBY_RBDX
AAA_22
TrwB_AAD_bind
Zeta_toxin
ADDB_N
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WWR38295
LinkDB
All DBs
Position
565565..567784
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRSQLQPGMRLRVPFGRREMIGILVEVVDHSEVP
AEKLKPAIALLDATPPLPASLFKLCLWTSQYYQHSLGDTLSWALPVLLRQGELAETRQER
FWQIAPGARLDDPRVARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKELVT
VEIRRHAPSERHEHWLAQPELPLNDEQRAAYEAIRAGFDHFHAFLLAGVTGSGKTEVYLQ
LIRETLQAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLESWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSECQRCDARMTVHQRSGELRCHHCGYVERVPRNC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNQLFATIQKGQPCIL
IGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRAAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLGELNLGGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSQWLLVLEQ
MPSGRQVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccattttgcgccttgccctgccttcccccttgcgccgcctgtttgattac
cgggcgcctgctggcgtgctgcgcagtcaattacagcccggcatgcgcctgcgggtaccg
ttcggacgacgggagatgattggcatactggtcgaggtggtcgaccacagcgaagtacca
gccgaaaagctcaagcccgccatcgccctgctcgacgccacgccgccgctgcccgcctct
ttattcaagctgtgcctgtggacgtcgcagtactaccagcacagcctgggcgacaccctg
agctgggcgttgccagtattgctgcgccagggtgagctggccgaaacgcgccaggaacga
ttctggcagattgccccgggcgcccggcttgacgacccccgtgttgcccgcgctccacgc
cagcgtgaagcactggccaccctcgcccagcacccccacggcgtggcgcatcaactgtta
agcaagttgatgctgagcaaggacagcctcgacctgctgctggccaaggagctggtcact
gtcgagatccgccgccatgcacccagtgagcgccatgaacattggctggctcagcccgag
ttgccgctcaacgacgagcaacgcgctgcctacgaagcgattcgcgcaggtttcgaccac
ttccatgccttcctgctggccggggtcactggcagcggcaagaccgaagtgtatttgcaa
ttgatccgtgaaaccctccaggccggcaagcaggcgctggtgctgatcccggaaatcaac
ctgggtccgcaaaccctggcccgcttcgaacaacgcttcaatgcccgtattgcgctggtg
cattctgcggtcaatgaccgcgagcgcctggaaagctggctggcagcccgtgatggcgaa
gccgacattattattggcacgcgttcagcgctgttcaccccgatgaaaaacccggggctg
atcattatcgacgaagagcacgacggctcttataaacagcaggaaggtttgcgctaccac
gcccgcgacctggcactggtgcgtgcccggcaggaaaacatccccatcgtactcggctcc
gcaacgccatcactggaaagcctgcacaacgcctacaccggccgttacggcttgctgcgc
ctgaacgaacgtgctggcggggccaaacagcctcgttttctgcgcctggatgtgaaaagc
cgtcccctggacagcggcatttccgggccgatgcaacaggccatcggccaaaccctcgct
gcaggccagcaagtactggtgtttttgaaccgtcgaggcttcgcgccgacattgctgtgc
catgactgtggctggatgtctgaatgccagcgctgcgatgcgcgcatgaccgttcatcag
cgctctggcgagctacgctgccatcactgcggctacgtcgagcgcgttccgcgcaactgc
ccgcaatgcggcaaagtcgacctgcggcctgtaggtgccgggactgagcgcgccgaagag
cggctggggattttgttccccgactacccggtactgcgggtagatcgagacagcacctcg
cgcaaggacgcgatgaaccaactgtttgccacgatccagaagggccagccgtgcatactg
atcggcacacaaatgctcgccaaaggccatcacttcccccgggtgacgctggtatcgatc
ctggatgccgatggcggcctgttctccggcgacttccgcgccagcgagcgcatggcccag
ctgatcgttcaggtcgcgggccgggccggccgggctgaagagccgggcaaggtgattatc
cagacccatctggccgaccacccgctgctgatccaactgaccgagcagggttacttcgcc
ttcgccgaacaggccctgagcgaacgccgggcggcaggactgccgcctttcgcccatctg
gcgctgctgcgcgcagaagcccacaaaccgggacaagccgaaggttttctggatgaagcc
tgcagcgaggctgaacgcctgctgggtgagctgaacctggggggtatcgagttgctcggc
cccgtgcctgcgccaatggagcgcagggccggacgctatcgtgctcaactactattacag
gccaatgcccgtgcaccgctgcatcgtttactgagccaatggctgctggtccttgagcaa
atgcccagcggtcgtcaggtgcgctggtcgctggacgtggacccggtagacctttattga
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