Pseudomonas bubulae: V6B39_03360
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Entry
V6B39_03360 CDS
T10711
Symbol
gabT
Name
(GenBank) 4-aminobutyrate--2-oxoglutarate transaminase
KO
K14268
5-aminovalerate/4-aminobutyrate aminotransferase [EC:
2.6.1.48
2.6.1.19
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00250
Alanine, aspartate and glutamate metabolism
pbub00310
Lysine degradation
pbub00650
Butanoate metabolism
pbub01100
Metabolic pathways
pbub01120
Microbial metabolism in diverse environments
Module
pbub_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
V6B39_03360 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
V6B39_03360 (gabT)
00310 Lysine degradation
V6B39_03360 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pbub01007
]
V6B39_03360 (gabT)
Enzymes [BR:
pbub01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
V6B39_03360 (gabT)
2.6.1.48 5-aminovalerate transaminase
V6B39_03360 (gabT)
Amino acid related enzymes [BR:
pbub01007
]
Aminotransferase (transaminase)
Class III
V6B39_03360 (gabT)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWR38489
LinkDB
All DBs
Position
complement(782368..783651)
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AA seq
427 aa
AA seq
DB search
MSNKTNASLMKRREAAVPRGVGQIHPIFAESAINATVTDVEGREFIDFAGGIAVLNTGHL
HPKIIAAVQEQLTKLTHTCFQVLAYEPYVELCEKINAKVPGNFDKKTLLVTTGSEAVENA
VKIARAATGRAGVIAFTGAYHGRTMMTLGLTGKVVPYSAGMGLMPGGIFRALYPCELHGV
SVDDSIASIERIFKNDAEPKDIAAIIIEPVQGEGGFYVAPKAFMARLRELCDKHGILLIA
DEVQTGAGRTGTFFAMEQMGVTADLTTFAKSIAGGFPLAGVCGKAEYMDAIAPGGLGGTY
AGSPIACAAALAVLDVFEEEHLLDRCKEVGERLVTGLKAIQAKHPVIGDVRALGAMIAVE
LFEGGDSHKPNPTAVAQVVAKARDKGLILLSCGTYGNVLRVLVPLTSPNEQLDKGLAIIE
ECFAELA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagaccaacgcatccctgatgaaacgccgtgaagccgctgttccgcgcggt
gttggccagatccacccgattttcgccgaatcggcgattaacgccaccgttaccgacgtt
gaaggccgcgagttcatcgacttcgccggcggtatcgcggtactgaacaccggtcacctg
cacccgaaaatcattgccgccgttcaagagcaactgaccaagctgacccacacctgcttc
caggtactggcttacgagccttacgtcgagctgtgcgaaaagatcaacgccaaggtcccg
ggcaatttcgacaagaaaaccctgttggtcaccaccggttccgaagccgttgaaaacgcc
gtgaaaatcgctcgtgccgcaactggccgtgccggcgtgatcgccttcactggcgcatac
catggccgtaccatgatgaccctgggcctgaccgggaaagtcgtaccgtactcggcaggc
atgggtctgatgccaggcggtatcttccgcgcgctgtacccgtgcgaactgcatggcgtg
agcgtggatgactccatcgccagcatcgagcgcattttcaagaacgacgccgagcctaaa
gacatcgctgccatcatcatcgagccggtacagggcgaaggtggtttctatgtggcgccg
aaagcgttcatggcccgtctgcgcgagctgtgcgacaagcacggcatcctgctgatcgcg
gatgaagtgcaaaccggcgctggccgtaccggcacgttcttcgctatggaacagatgggc
gtaacggccgacctgaccactttcgccaagtccatcgctggcggcttcccgctggccggt
gtgtgcggcaaggccgagtacatggacgccatcgctccaggcggtctgggcggcacctat
gccggtagcccgattgcttgcgcagcagcgctggcggtactggatgtgtttgaagaagag
catctgctggaccgttgcaaggaagtcggcgagcgcctggtaaccggcctcaaggctatc
caggccaagcacccggtgatcggtgatgtgcgtgcgttgggcgcgatgatcgcggtcgag
ctgttcgaaggcggcgattcgcacaagccaaatccgacggcagtggcacaagtggttgcc
aaggctcgcgacaagggtctgatcctgctgtcgtgcggcacttacggcaacgtcctgcgc
gtactggtaccgctgacctcgcctaacgagcaattggacaaaggtctggccatcatcgag
gagtgcttcgctgaactggcgtga
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