Pseudomonas bubulae: V6B39_05315
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Entry
V6B39_05315 CDS
T10711
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pbub Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbub03021
]
V6B39_05315 (rpoH)
Transcription machinery [BR:
pbub03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V6B39_05315 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
ImpA_N
UCR_14kD
IF2_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
WWR38856
LinkDB
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Position
1201583..1202437
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AA seq
284 aa
AA seq
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MTTSLQPAYALVPGANLEAYVNTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNDEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDADWTDNSTSNLHEALEVLDDRSRDI
LYQRWLAEEKATLHDLAQKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccacttctttgcaacctgcgtatgcgttggtccctggtgcgaacctcgaggcctat
gtcaatacggtgaacagcattccattgctgacaccggagcaggagcgtgaactggccgag
agtctctattatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcgt
tttgttgtacacattgcccgtagttattcgggctatggcctggctcaggctgacctgatc
caggaaggcaacgtcggcctgatgaaggcggtcaaacgcttcaaccctgaaatgggtgtg
cgtctggtgtcttttgcggtgcactggatcaaggcagagatccacgaatttatcctgcgc
aactggcggatcgtgaaagtcgcgaccaccaaggctcagcgcaaattgttcttcaacctg
cgcagccagaaaaaacgtctcgcctggttgaacaacgatgaagtgcatcgtgtggctgaa
agcctcggcgtagagcctcgcgaagtgcgcgagatggaaagccgcctgaccggtcatgat
atggcgttcgacccggcagccgaagctgacgacgacagtgcgttccagtcgccagccaac
tacctggaagaccaccggtatgacccggcgcgccaactggaagatgctgactggaccgac
aactccaccagcaaccttcacgaagcgctggaagtgctggacgaccgcagccgtgacatt
ctgtatcagcgctggctggctgaagaaaaagccacgctgcacgacctggcgcagaagtac
aacgtgtcagccgagcggattcgtcagctggaaaaaagcgcgatgaacaagctcaaactg
tcgattgccgcctga
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