Pseudomonas bubulae: V6B39_06040
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Entry
V6B39_06040 CDS
T10711
Name
(GenBank) carbon-nitrogen hydrolase family protein
KO
K01506
5-aminopentanamidase [EC:
3.5.1.30
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00310
Lysine degradation
pbub01100
Metabolic pathways
pbub01120
Microbial metabolism in diverse environments
Module
pbub_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
V6B39_06040
Enzymes [BR:
pbub01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.30 5-aminopentanamidase
V6B39_06040
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Gene cluster
GFIT
Motif
Pfam:
CN_hydrolase
Motif
Other DBs
NCBI-ProteinID:
WWR38995
LinkDB
All DBs
Position
complement(1358990..1359784)
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AA seq
264 aa
AA seq
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MRIALYQCPPLPLDVAGNLQRLRETAQQADNIDLLVLPEMFLTGYNIGAQAVAELAQAHD
GDAAQQIAKLAKATGMAIVYGYPERGADGHIYNSAQLIDAHGKSLCNYRKTHLFGELDHS
MFSQGPDSFPVIELNGWKLGLLICYDLEFPENTRRLALAGAEVIVVPTANMVPFEFIADV
TVRCRAFENHCYVAYANYCGHEGEIHYCGQSSIAAPNGKQIALAEQDETLLVATLQRQQL
TDAKTGNFYLADRRPELYGELSKG
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattgccctttaccaatgcccgcctctgcccttggatgttgcgggcaatctgcag
cgtttgcgtgaaacagcccagcaagccgataacattgacctgctggtgttgcccgaaatg
ttcctcaccggctacaacatcggcgcgcaagccgtagccgaactcgcacaagcccacgac
ggcgacgccgcacagcaaattgccaaactggccaaagccacgggcatggccattgtgtac
ggctaccccgagcgcggtgcagacggacatatctacaacagtgcacagttgatcgacgca
cacggcaaaagtctgtgcaactaccgcaagactcacctgttcggcgaactcgatcactcg
atgttcagccagggccccgactcattcccggtcattgaactcaacggctggaagctcggc
ctgctgatctgctacgacctcgagtttccggaaaacacccgcaggctggccctggccgga
gctgaagtgattgtggtacccaccgcgaatatggtgcccttcgagttcatcgccgatgtc
accgtgcgttgccgcgctttcgaaaaccactgctatgtagcctacgccaactactgtggc
catgaaggcgagatccattactgcggccaaagcagcatcgccgcacccaacggcaagcag
attgccctggccgaacaggatgagaccctgctggtggcaacgttgcaacgccaacagctg
actgatgcaaaaaccggcaacttttacctcgcagaccgtcggcccgagctatatggcgag
ctgagcaagggctaa
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