Pseudomonas bubulae: V6B39_06615
Help
Entry
V6B39_06615 CDS
T10711
Name
(GenBank) citrate/2-methylcitrate synthase
KO
K00249
acyl-CoA dehydrogenase [EC:
1.3.8.7
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00071
Fatty acid degradation
pbub00280
Valine, leucine and isoleucine degradation
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01212
Fatty acid metabolism
Module
pbub_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
pbub_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
V6B39_06615
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
V6B39_06615
Enzymes [BR:
pbub01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.7 medium-chain acyl-CoA dehydrogenase
V6B39_06615
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Citrate_synt
Acyl-CoA_dh_C
Acyl-CoA_dh_1
Acyl-CoA_dh_M
Acyl-CoA_dh_2
ACOX_C_alpha1
Motif
Other DBs
NCBI-ProteinID:
WWR39100
UniProt:
A0ABZ2HBH2
LinkDB
All DBs
Position
complement(1472692..1475694)
Genome browser
AA seq
1000 aa
AA seq
DB search
MSAYKVSLRELRFFLWELHKTDQNFLTRAPFNDKNRTYYDALLERARAFAYELGKAYQAS
DRQECHLLENGKVEIPKEFHGLWQRYKEEWIQVLGIDSESQQPALPPLIRQTTQEMFMGA
NPAFMTYGGFNFPAIKLLKLHATAAQKATYLRKLQRYDWDACFCATEQQAGSDLTAVTTV
AKPLENGEYAVSGEKVYISAGMHTLTENTVYFVLGRINTTTSTSYSLSCLLVPRFWPNPE
TGELEDNHVECTSLLRKMGLKGCANTQLVFGRTGTTRAVLLGDRKNAGLLQLVPLMNQAR
MSTAIIGLGLASSAYLHSVDFAGKRFQGRAISRTSDASAPPVAIIEHADVQRMLLEMKAR
VEGCRGLLGKLTGASTQAFALEAEPVLDEAQVEKYRKLVLLFTPVCKAFVSDQAWKICEL
AIQVHGGIGYTDAYPVEQNARDVKILSIWEGTNYIQSQDLVRDKLGFGRNSRLIKFLREE
LDAFLNNTTGVGSELHDQFPALENAMVAVEQALTHINEHVREGRTHETSQFYTRFLEMLG
LTASAWVLLESACLAERQLREPLSAEEAAFYRGKVKTAHYFFANILPTVTQHAHTIENLL
VAHCGIALDELAQADTLIPTPPQSLFGGPRTLYRGTNIDGATIEPNEGLWVRGRNLNDLI
GIVDFPTALWLAWFGSLPTPAESQAVDALLVRIASHLSAEPAYRRGIEAVADSGAGIVQA
AACGLLGDLAALEHIVLIEATVRDLPTHQDFIEGLVSVASTPHFLQTALGYSAPGAASTH
HAEVVLTAMGATDIDPLAISVVDALLVAWHAGFGYITPTVLVPRTAIGTGVTLAQAVAAG
FMASGPNHVGAAEEAMTWLKTISAQASPADIRQAVDLALDQPGNLLFGFGHPLFVQDPRP
PHIRALFSQWGFGGRYLEIYDVVCAHVLERKGLRPNIDFITAAALLDLGVTQARWGVGLG
LCGRVAAMVAHAIERRDRPAFGVNSKAARKLLATVPVGWL
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttataaagtcagcctgcgtgagcttcgcttttttttgtgggaactgcataaa
accgaccagaattttctcacacgggcgccgttcaacgacaaaaatcgtacctactacgat
gccttgctggagcgcgccagggcgttcgcttatgagttaggcaaggcctatcaagcctcc
gaccgacaggaatgccacttgctggaaaacggcaaggtcgaaatccccaaagagttccac
ggactttggcagcgctataaggaagagtggattcaggtgctgggcatcgacagcgaatcc
cagcaaccggccttgccacccctgatccggcaaaccacccaggaaatgttcatgggcgcc
aatccggcgttcatgacctacggcggcttcaattttccggccatcaagctgttgaagctg
cacgctaccgcagcgcaaaaggcaacgtacctgcgcaagcttcagcgctacgactgggac
gcgtgtttctgcgccaccgagcagcaggccggcagcgacctgacagcggtcaccactgtc
gcaaaaccccttgaaaacggcgaatacgccgtcagcggcgaaaaggtctacatctcggcg
ggcatgcatacgctgaccgaaaacaccgtttactttgtcctgggccgcatcaataccacc
acctcgacctcctactcgctgtcctgcctgctggtgccgcgcttctggcctaatcccgaa
acgggcgagctggaagacaaccatgtcgagtgcacttcattgctgcgcaagatgggattg
aagggctgcgctaatacccaactggtgtttggtcgaaccggcaccacccgcgccgtactg
ctgggcgaccgcaagaatgccggattgctgcaactggtgcccttgatgaaccaggcccgt
atgagcacggcaattatcggcttgggcctggcttccagcgcttatctgcattcagtcgat
ttcgccggcaaacggttccagggccgtgcaatcagtcgcacctccgatgccagcgccccg
cctgtggccatcatcgaacacgccgacgtgcagcgcatgctgctggaaatgaaggcccgg
gtagaaggttgccgtggcctgctcggtaagttgaccggcgcatcgacccaggcatttgcc
ctggaagccgagccggtactggacgaagcccaggtcgaaaaataccgcaagctggtgctg
ctgttcacgccggtgtgcaaggcattcgtctcggaccaggcctggaaaatctgcgaactg
gcgatacaagtgcatggcggtatcggctacaccgatgcttaccctgtcgagcaaaatgcg
cgcgacgtgaaaatcctgtcgatctgggaagggaccaactacatccagtcccaggacctg
gtgcgcgacaagctcggttttggcaggaactcacgcctgatcaagtttctgcgcgaagag
ctggatgccttcttgaacaacacaacgggtgtcggttctgagctgcacgaccaattcccg
gcgctggaaaacgccatggttgccgtggagcaggcgctaacccatatcaatgagcacgtg
cgtgaaggccgcacacacgaaaccagccagttctatacccgcttcctggaaatgctcggt
ctcaccgccagcgcctgggtcttgcttgaatcggcctgcctggccgagcgtcagttgcgc
gagccactgagtgccgaagaagccgctttttaccgtggcaaggtcaaaaccgcccattat
tttttcgccaacatcctgccgacggtcacgcaacacgcacacacaatagaaaacctgctg
gtcgcccactgcggcattgcgcttgatgagttggcacaggccgacacgctgatacccaca
ccgccgcagagcctgtttggcggaccacgcaccctgtatcgcggtaccaatatcgacggc
gccacgattgagcctaatgaagggctgtgggtcaggggtcgcaacctcaatgacctgatc
ggcattgtcgacttccccacagcgctatggctggcgtggtttggcagcctgccgacccct
gctgagagccaggccgttgacgcccttctggtacgcattgccagccacctgtcggcggag
cctgcctatcgacgtggcatcgaagccgtggccgacagcggtgccggcatcgttcaggcc
gccgcctgcggccttctcggtgatctggcagcgctggaacatattgtcctgatcgaagcc
accgttcgcgacttgcctacgcatcaggattttatcgagggcctggtcagcgttgcttca
acgccgcactttctgcaaacggcgctcggttatagcgcccccggcgcagcatcgacgcat
cacgccgaggtcgtgttgacggcaatgggcgcgaccgatatcgacccattagccattagt
gtcgttgatgccctgctggtggcctggcacgccggtttcggctacatcacgccgacggtg
ctggtaccccgtaccgccatcggcaccggtgtcacccttgcccaggccgtggcggccggt
ttcatggccagcggaccgaaccatgtcggcgcagcagaagaagcgatgacctggctcaag
accatcagtgcgcaagccagccctgctgacatacggcaagcggtcgacctcgcgctggat
cagccgggcaacctgttgtttggctttggccatccgctgtttgtgcaggacccacgaccg
ccgcacatcagggccctgttttcccagtggggtttcggggggcgctatctggagatttac
gacgttgtttgtgcccacgttctggagcgcaaaggcctacgtccgaatattgacttcatc
accgccgcagccctgctcgatctcggcgtgacccaagcccgttggggtgtcggcctgggg
ctctgtggccgggtggcggccatggtcgcgcatgccatcgagcggcgcgatcgccctgct
ttcggtgtcaacagcaaagccgcgcgcaagttgttggccaccgttccagtggggtggctg
taa
DBGET
integrated database retrieval system
