KEGG   Pseudomonas bubulae: V6B39_06630
Entry
V6B39_06630       CDS       T10711                                 
Name
(GenBank) PLP-dependent decarboxylase
  KO
K01586  diaminopimelate decarboxylase [EC:4.1.1.20]
Organism
pbub  Pseudomonas bubulae
Pathway
pbub00300  Lysine biosynthesis
pbub00470  D-Amino acid metabolism
pbub01100  Metabolic pathways
pbub01110  Biosynthesis of secondary metabolites
pbub01120  Microbial metabolism in diverse environments
pbub01230  Biosynthesis of amino acids
Module
pbub_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pbub00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    V6B39_06630
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    V6B39_06630
Enzymes [BR:pbub01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.20  diaminopimelate decarboxylase
     V6B39_06630
SSDB
Motif
Pfam: Orn_Arg_deC_N Orn_DAP_Arg_deC Ala_racemase_N PfaD_N
Other DBs
NCBI-ProteinID: WWR39103
UniProt: A0ABZ2HA09
LinkDB
Position
complement(1478316..1479491)
AA seq 391 aa
MTMTTACAPVRSDDATTDQWLLNLKTPCYVLDPTVVQARYADLRERLGTPLIVSLKANPN
LDLLIRCGHAFIDGVELASLGELDIVAGRINTPKYVNNPSMDEDFMRAALASRCTFIIDS
LEQAQRLIRVIGKQTAPQTVLRLNAGQLVSSGKHPADHFGMSRQDALLTTVALAQANVPI
IGLHTFAGSNSFHIDDKGADAAALANALAAFAPQVARLTGMPVEFLNVGGGFSEHFPSQA
QTFDAYRQRIAPLQKDFKVVHESGRGVFAGAGTFVTRVRSVKALGERYVAVCDGGLSHNF
LLAKTEAMLKNYAQPRLLRRQQAPGDAPPLPIQFVGSTCSRADVIGWSHELSAPPSVGDL
VIFDNCGAYNQTYSVSAFLSQSPAHTYIHQS
NT seq 1176 nt   +upstreamnt  +downstreamnt
atgaccatgaccaccgcctgcgcgcctgtcagaagcgacgacgcaacgaccgaccaatgg
ctgctgaatctgaaaacgccttgctacgtactggaccccactgtcgtacaggcgcgttac
gctgatttacgcgagcgtctgggtacaccgttgattgtgtcgctcaaggccaatccaaac
ctggatttgttgatccgctgcggccatgccttcatcgacggtgtggagctggccagcctg
ggcgaactcgatattgtggcgggtcgcatcaacacccccaaatacgtaaacaatccgtca
atggatgaagatttcatgcgcgcggctctggcctcacgctgcacgttcatcatcgacagc
ctggagcaggcgcagagactgattcgcgtcatcggcaaacagaccgcgccgcaaacggtt
ttgcgcttgaacgcgggccaactggtcagctcgggcaaacacccggcggaccacttcggc
atgagtcgccaagacgccttgctgacgacggttgcattggcccaggccaacgtgccaatc
atcggcctccatacgtttgcgggctccaatagctttcacatcgatgacaagggtgccgat
gccgccgcccttgccaatgcgctcgctgcattcgcgccacaagtagcacgtctcaccggc
atgccggttgagtttcttaacgtcggtggcggtttctccgagcacttccctagccaggca
cagacgtttgacgcttatcgccagcgcattgcgccgctgcaaaaagacttcaaggtcgtc
cacgagtccgggcgtggcgtcttcgctggcgcaggcactttcgtgacccgcgtacgttca
gtcaaagccttgggtgagcgctacgttgcagtctgcgacggaggtctgagccacaatttc
ctgctggccaaaactgaggccatgttgaagaactacgcgcagccgcgcctgctgcggcgt
caacaggcaccgggggacgcgcccccgttgccgatccagttcgtgggcagcacctgcagc
cgcgccgacgtgatcggctggagtcatgaactgtcggccccgccgagcgtgggcgatctg
gtgatcttcgacaactgcggcgcctacaaccagacgtacagcgtcagcgctttcctctcg
cagagcccggcacacacctatatccaccaatcctag

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