Pseudomonas bubulae: V6B39_06630
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Entry
V6B39_06630 CDS
T10711
Name
(GenBank) PLP-dependent decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00300
Lysine biosynthesis
pbub00470
D-Amino acid metabolism
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01120
Microbial metabolism in diverse environments
pbub01230
Biosynthesis of amino acids
Module
pbub_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6B39_06630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6B39_06630
Enzymes [BR:
pbub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
V6B39_06630
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PfaD_N
Motif
Other DBs
NCBI-ProteinID:
WWR39103
UniProt:
A0ABZ2HA09
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Position
complement(1478316..1479491)
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AA seq
391 aa
AA seq
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MTMTTACAPVRSDDATTDQWLLNLKTPCYVLDPTVVQARYADLRERLGTPLIVSLKANPN
LDLLIRCGHAFIDGVELASLGELDIVAGRINTPKYVNNPSMDEDFMRAALASRCTFIIDS
LEQAQRLIRVIGKQTAPQTVLRLNAGQLVSSGKHPADHFGMSRQDALLTTVALAQANVPI
IGLHTFAGSNSFHIDDKGADAAALANALAAFAPQVARLTGMPVEFLNVGGGFSEHFPSQA
QTFDAYRQRIAPLQKDFKVVHESGRGVFAGAGTFVTRVRSVKALGERYVAVCDGGLSHNF
LLAKTEAMLKNYAQPRLLRRQQAPGDAPPLPIQFVGSTCSRADVIGWSHELSAPPSVGDL
VIFDNCGAYNQTYSVSAFLSQSPAHTYIHQS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgaccaccgcctgcgcgcctgtcagaagcgacgacgcaacgaccgaccaatgg
ctgctgaatctgaaaacgccttgctacgtactggaccccactgtcgtacaggcgcgttac
gctgatttacgcgagcgtctgggtacaccgttgattgtgtcgctcaaggccaatccaaac
ctggatttgttgatccgctgcggccatgccttcatcgacggtgtggagctggccagcctg
ggcgaactcgatattgtggcgggtcgcatcaacacccccaaatacgtaaacaatccgtca
atggatgaagatttcatgcgcgcggctctggcctcacgctgcacgttcatcatcgacagc
ctggagcaggcgcagagactgattcgcgtcatcggcaaacagaccgcgccgcaaacggtt
ttgcgcttgaacgcgggccaactggtcagctcgggcaaacacccggcggaccacttcggc
atgagtcgccaagacgccttgctgacgacggttgcattggcccaggccaacgtgccaatc
atcggcctccatacgtttgcgggctccaatagctttcacatcgatgacaagggtgccgat
gccgccgcccttgccaatgcgctcgctgcattcgcgccacaagtagcacgtctcaccggc
atgccggttgagtttcttaacgtcggtggcggtttctccgagcacttccctagccaggca
cagacgtttgacgcttatcgccagcgcattgcgccgctgcaaaaagacttcaaggtcgtc
cacgagtccgggcgtggcgtcttcgctggcgcaggcactttcgtgacccgcgtacgttca
gtcaaagccttgggtgagcgctacgttgcagtctgcgacggaggtctgagccacaatttc
ctgctggccaaaactgaggccatgttgaagaactacgcgcagccgcgcctgctgcggcgt
caacaggcaccgggggacgcgcccccgttgccgatccagttcgtgggcagcacctgcagc
cgcgccgacgtgatcggctggagtcatgaactgtcggccccgccgagcgtgggcgatctg
gtgatcttcgacaactgcggcgcctacaaccagacgtacagcgtcagcgctttcctctcg
cagagcccggcacacacctatatccaccaatcctag
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