Pseudomonas bubulae: V6B39_06790
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Entry
V6B39_06790 CDS
T10711
Symbol
ispA
Name
(GenBank) (2E,6E)-farnesyl diphosphate synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00900
Terpenoid backbone biosynthesis
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
V6B39_06790 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pbub01006
]
V6B39_06790 (ispA)
Enzymes [BR:
pbub01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
V6B39_06790 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
V6B39_06790 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
V6B39_06790 (ispA)
Prenyltransferases [BR:
pbub01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
V6B39_06790 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
WWR39134
UniProt:
A0ABZ2H8B5
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All DBs
Position
complement(1509452..1510339)
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AA seq
295 aa
AA seq
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MIDAYQISSQARVNAALESLFVAPAPELARLYEAMRYSVMNGGKRVRPLLAYAACEALGS
TPEQANGAACAVELIHAYSLVHDDLPAMDDDDLRRGQPTTHKAFDEACAILAGDGLQSLA
FSALLDPRLSNLNADTRLRMVTALAFAAGPAGMVGGQAIDLGSVGLKLDQAALEYMHRHK
TGALIEASVQLGALASGHANEDNLHALSVYARAIGLAFQVQDDILDVESDTATLGKRQGA
DIARDKPTYPALMGLEQAKGYALELRDQALNALRHFDAAAEPLRELARYIVERRH
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgcttaccagatcagcagccaggcccgtgtcaatgcggcgcttgaaagcctg
tttgtcgctccggctcccgagctggcccgtctttatgaggccatgcgctacagcgtcatg
aatggcggcaaacgggttcgcccgctgctggcctatgccgcctgcgaagccctcggcagt
acacctgagcaagccaatggcgcggcctgtgccgtggaattgatccacgcctattcgctg
gtgcacgacgacttgcccgcaatggacgatgacgatctgcgtcgcggccagccaaccacc
cacaaagcgttcgacgaagcctgcgccattctggcgggcgacggcctgcaaagcctggcg
ttcagcgctttgctcgacccgcgcctgagcaacctgaacgccgacacccgtttgcgcatg
gtcacggccctggcttttgctgcaggtccggcgggcatggtcggcgggcaagcgatcgac
ctcggttcggtggggctcaagctcgaccaggccgcgctggaatacatgcaccggcacaag
accggcgccctgatcgaagccagcgtgcaactgggcgccctggccagcggtcatgcaaac
gaagacaacctgcacgcactgagcgtttatgcacgggccattggcctggcgtttcaggtt
caggacgacattctggatgttgaaagcgataccgcaactctgggtaaacgccagggggcc
gacatagcacgggacaaaccgacctaccccgccctgatggggctggagcaggccaaaggc
tatgcgcttgagctgcgcgaccaggcgctcaacgccctgcgacattttgatgcagccgcc
gaaccgctgcgtgaactggcacgttatatcgttgagcgacgccactaa
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