Pseudomonas bubulae: V6B39_07025
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Entry
V6B39_07025 CDS
T10711
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase family protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00550
Peptidoglycan biosynthesis
pbub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6B39_07025
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pbub01002
]
V6B39_07025
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
V6B39_07025
Enzymes [BR:
pbub01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
V6B39_07025
Peptidases and inhibitors [BR:
pbub01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
V6B39_07025
Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
V6B39_07025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
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Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Peptidase_S13
Beta-lactamase
Motif
Other DBs
NCBI-ProteinID:
WWR39178
UniProt:
A0ABZ2HA82
LinkDB
All DBs
Position
1562616..1563773
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AA seq
385 aa
AA seq
DB search
MNITTFAKRLCLLVPLIVTPAAWAVEMMPSPPQLAAKSYVLMDASSGNVLVENNGDQRLP
PASLTKLMTAYIATLEIRRGQIGENDPVTVSENAWRTGGSRMFIKVGTQVSVSDLLHGII
IQSGNDASVALSEHIAGSEDAFADMMNKTAGELGMSNSHFMNPTGLPNPDHYSSAHDMSL
LARAIIHEDPTHYAIYSQKEFFWNGIKQPNRNLLLWRDKTVDGLKTGHTDEAGYCMVSSA
VRDGMRLIAVVFGTNSEAARAAETQKLLTYGFRFFETQTFYQKGTELAQAPVWKGTTNQV
KAGLADDLTMTLPKGQLKKLAASMTMNPQLMAPIAKGDVIGKVEVKLDDKVVHSADLIAL
EPVEEGGIFRRVWDSIRLFFYGLFN
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcaccacctttgccaaacgcctgtgcctgctagtaccgctgatcgtcactcct
gccgcctgggcagtcgagatgatgccgtcgccaccacaacttgcagccaagtcctatgtt
ctgatggatgccagcagcggtaacgtgctggtcgagaacaacggcgaccagcgtctgccg
ccagccagcctgaccaagctgatgaccgcttacatcgcgactctggaaatccgtcgtggc
cagatcggcgaaaacgacccggtaactgtcagcgaaaacgcatggcgcaccggtggttcg
cggatgttcatcaaggtcggcacccaggtgtcggtcagcgacctgctgcatggcatcatc
atccagtcgggtaacgacgccagcgtcgccctgtccgagcacattgccggcagcgaagac
gcttttgccgacatgatgaacaagaccgccggtgagctgggcatgtccaacagccacttc
atgaacccgaccggcctgccgaatccggatcactactcgtcggctcacgacatgtcgttg
ctggctcgcgccatcatccacgaagacccgactcactacgcgatctactcgcagaaagag
ttcttctggaacggtatcaagcagcctaaccgcaacctgttgttgtggcgcgacaaaacc
gttgatggtctgaaaaccggtcacaccgacgaagccggctattgcatggtgtcttcggcc
gtacgtgatggcatgcgcctgatcgccgtggtgttcggcaccaacagtgaagcggcccgt
gctgcagagacccagaagctgctgacctacggtttccgtttcttcgaaacccagaccttc
taccagaagggcaccgagctggctcaggctccggtctggaaaggcaccaccaaccaggtc
aaggctggcctggcggatgacctgaccatgaccctgccaaaaggccaactgaaaaagctg
gctgcaagcatgaccatgaacccgcaactgatggcccctatcgccaaaggtgatgtgatc
ggcaaggttgaggtcaaacttgacgacaaggttgtgcacagtgctgacctgatcgccctt
gagcccgtcgaggaaggtggtattttccgacgcgtgtgggatagcatccgtctattcttc
tacgggctgttcaactga
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