KEGG   Pseudomonas bubulae: V6B39_07455
Entry
V6B39_07455       CDS       T10711                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pbub  Pseudomonas bubulae
Pathway
pbub03030  DNA replication
pbub03430  Mismatch repair
pbub03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pbub00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    V6B39_07455
   03430 Mismatch repair
    V6B39_07455
   03440 Homologous recombination
    V6B39_07455
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pbub03032]
    V6B39_07455
   03400 DNA repair and recombination proteins [BR:pbub03400]
    V6B39_07455
Enzymes [BR:pbub01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     V6B39_07455
DNA replication proteins [BR:pbub03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     V6B39_07455
DNA repair and recombination proteins [BR:pbub03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     V6B39_07455
SSDB
Motif
Pfam: RNase_T Rv2179c-like Ribosomal_L26 DUF1059 RNase_H_2
Other DBs
NCBI-ProteinID: WWR39259
UniProt: A0ABZ2H8T0
LinkDB
Position
1659884..1660495
AA seq 203 aa
MERIAVIDFETTGISPSSTCRATEIAVVILERGRIVERYQSLMNAGVRVPGFIEQLTGIS
NAMLRTAPSAEQVMNEVNEFVGITPLLAHNAAFDQKFWDFEMGRIKRTRLQNFACSLLLA
RRLMPAAPNHKLGTLTTFADLPHTGKAHRAMADAEMAANLTAHLAEQLRQKHGLRELNHD
LLCSLQKVPAAKINEHLKRYRGF
NT seq 612 nt   +upstreamnt  +downstreamnt
ttggaacgcatcgcggtaattgactttgagaccaccggcatctccccgagcagcacctgc
cgggccactgaaattgccgtggtgattcttgagcgcggtcgcattgtcgagcgttatcaa
agcctgatgaatgccggtgtgcgggtgcctgggtttatcgagcagttgaccggcatcagc
aacgccatgttgcgcaccgcgccgtcggctgagcaggtgatgaacgaggtcaacgagttc
gtcggcattaccccgttgctggcgcacaatgctgcgtttgaccaaaaattctgggatttt
gaaatgggccgcatcaagcgcacccgtttacagaacttcgcctgttcattgttgctggcg
cgtcgcctgatgcctgcggcgcctaaccacaagctgggcacgctgaccacctttgccgac
ttgccccacaccggcaaagctcaccgggccatggccgatgcggaaatggcggccaacttg
acggctcacctggctgagcaactgcgccagaagcacgggttacgtgaattgaaccacgac
ctgttgtgcagcttgcagaaagtcccggcggcgaagatcaatgagcatctcaagcggtat
cgcgggttttaa

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