Pseudomonas bubulae: V6B39_08380
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Entry
V6B39_08380 CDS
T10711
Symbol
murF
Name
(GenBank) UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00300
Lysine biosynthesis
pbub00550
Peptidoglycan biosynthesis
pbub01100
Metabolic pathways
pbub01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
V6B39_08380 (murF)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6B39_08380 (murF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
V6B39_08380 (murF)
Enzymes [BR:
pbub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
V6B39_08380 (murF)
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GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
POR
Motif
Other DBs
NCBI-ProteinID:
WWR39424
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Position
1855230..1856597
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AA seq
455 aa
AA seq
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MLKPLLLSEVAAALQGRVVDVDCRFSGVSIDSRAISKGQLFIALTGPRFDGHDYLNEVAA
KGAVAALVEREVPESALPQLVVKDTREALGRLGALNRAGYDKPVAAITGSSGKTTVKEML
ACILRTRGPVLATKGNLNNDLGVPLTLLELTAEHTAAVIELGASRLGEIAYTVAMTQPHV
AVLNNAGTAHVGEFGGPDKIVEAKGEIIEGLKADGIAVLNLDDKAFAIWKNRAAGRKVLS
FALNNPQADFYASDLSRDARGCPGFTLHSPLGSEQVQLNLLGTHNVANALAAAAAAHALG
VSLFGIKTGLEAVLPVKGRAVAQLTAAGLRIIDDTYNANPTSMCAAVDILAAFSGRTVLV
LGDIGELGEWAEQGHREVGAYAADKVSALYAVGPMMAHAVTAFGHQARHFANQADLIKAL
RAEHETNTTILIKGSRSAAMENVVAALCGSSGEKH
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcctctgttgctcagtgaagtggctgctgccctgcaggggcgtgtggtagat
gtcgactgccgtttcagcggggtcagcatcgacagccgggcgatcagcaagggtcagctg
tttattgcgctgaccggcccgcgtttcgatggccacgactacctcaatgaagtggctgcc
aagggcgctgttgccgcgctggttgagcgcgaagtgccggagtcggcgctgccgcaactg
gtggtcaaggacacccgcgaagctttgggtcgcctgggtgcgctcaaccgtgccggctac
gataaaccggtggcggcgattaccggctcaagcggcaagaccacggtcaaagaaatgctc
gcctgcattctgcgcacccgtggcccggtgctggcgaccaagggcaacctgaacaacgat
ctgggcgtgccgctgacgctgctggaactgacagctgagcacacggctgcggttattgag
ctgggcgcttcacgcctcggcgaaattgcctacaccgtggccatgacccagccccatgtc
gccgtgctcaacaatgccggtactgcccacgtgggcgagttcggtggcccggataaaatc
gtcgaagctaagggcgaaatcatcgaagggctgaaggctgacggaatcgctgtcctgaat
ctggatgacaaggcattcgccatctggaagaaccgggcagcggggcgcaaggtgctgagt
tttgccttgaacaaccctcaagccgatttttatgccagcgatctgagccgtgacgctcgc
ggttgcccgggcttcaccttgcacagcccgctgggtagcgagcaggtccaacttaacctg
ttgggcacccacaacgtggccaacgcactggccgctgcggcagctgctcacgccctcggc
gtgtcgctgtttggtattaaaaccggccttgaagccgtgttgccggtaaaaggtcgcgct
gtcgcgcaattgaccgccgcgggcctgcgaattattgatgacacttacaacgcaaacccc
acctcaatgtgcgctgccgttgatatactcgccgccttttccggccgcaccgtcctggtg
ctcggagatattggcgaactgggtgagtgggcggagcaaggacatcgtgaagtaggcgct
tatgccgccgacaaagtttcagcgctctatgcggtgggacccatgatggctcatgccgtc
actgcttttggacaccaggctcgtcacttcgccaatcaggctgacctgatcaaggcgctt
cgcgctgagcacgaaacaaacaccactattttgatcaagggctcgcgcagcgctgcgatg
gaaaacgtcgttgcggctttgtgcggttccagcggggagaaacattaa
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