Pseudomonas bubulae: V6B39_08390
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Entry
V6B39_08390 CDS
T10711
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00470
D-Amino acid metabolism
pbub00550
Peptidoglycan biosynthesis
pbub01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
V6B39_08390 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
V6B39_08390 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
V6B39_08390 (murD)
Enzymes [BR:
pbub01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
V6B39_08390 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pbub01011
]
Precursor biosynthesis
Amino acid ligase
V6B39_08390 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
WWR39426
UniProt:
A0ABZ2H9G7
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All DBs
Position
1857685..1859031
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AA seq
448 aa
AA seq
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MSLIASDHFRIVVGLGKSGMSLVRFLAQRGVSFAVADTRENPPELATLRRDYPQVEVRCG
ELDVEFLCRADELYVSPGLALATPALQAAAARGVKLSGDIDLFARNAKAPIVAISGSNAK
STVTTLVGEMAAAAGKRVAVGGNLGTPALDLLSDDIELYVMELSSFQLETTNQLGAEVAT
VLNVSEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALTRPLMSEGQPCWTFGLSAPD
FKAFGLREENGEKYLAFEFQNLMPVRELKVRGAHNQANALAALALGHAVGLPFDAMLASL
RNFTGLEHRCQWVRELDGVSYYNDSKATNVGAALAAIEGLGMDMDGKLILIAGGDGKGAD
FSGLRDSVAKHCRAAVLIGRDAGLIADALGDAVPQVRAGSLDEAIALSRSLAQSGDAVLL
SPACASFDMFKNYEERGQLFARAVEVLA
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
gtgtctctgatcgcttctgaccacttccgcatcgttgtcggcctcggcaagagcggcatg
tccctggtgcgcttcctggcgcaacggggcgtgtcgtttgccgtggcagatacgcgggaa
aacccgccggagcttgccacgctgcgccgtgactacccgcaagtggaagtgcgttgtggc
gagctggatgtcgaattcctgtgccgcgccgacgagctttacgtgagccccggcctggcc
ctggcgactccggcgctgcaagctgctgctgcccgcggcgtgaaactgtcgggcgacatc
gacctgttcgcgcgtaacgcgaaagcgcctatcgtggcaatcagtggttccaacgccaaa
agcaccgtgaccaccctggtcggtgaaatggctgcggcagccggcaagcgcgttgcggtg
ggtggcaaccttggcacgccggcactggacctgctcagcgatgatatcgagctgtacgtg
atggagctgtcgagcttccagctggagaccaccaaccagctgggtgctgaagtggccaca
gtgctcaatgtcagcgaagaccatatggaccgctacagcggcctgcctgcgtaccacctg
gccaagcaccggatcttccgtggcgcccggcaggtggtggtcaatcgtcaggatgccctg
acccgcccgctgatgagcgaaggtcagccgtgctggactttcggcctcagcgcgccggac
ttcaaggccttcggcctgcgtgaagaaaacggcgaaaaatacctcgctttcgaattccag
aacctcatgcccgtgcgcgagctgaaagtgcgtggcgcacataatcaggccaatgccctg
gctgccctggcgctgggtcacgcggttggtctgccgttcgacgccatgctcgccagcctg
cgcaatttcaccggtcttgagcatcgctgtcagtgggtgcgcgagctggatggcgtgagc
tactacaacgactccaaggccaccaacgtcggcgcggcactggctgctatcgaagggctg
gggatggacatggatggcaagctgatccttatcgccggtggcgacggcaagggcgcggat
ttcagcggcttgcgtgattcggttgccaagcactgccgcgcggcagtgttgataggtcgt
gatgcggggctgatagccgacgcccttggcgatgccgtgccgcaagtgcgtgccggttcg
ctggacgaagccatcgcactgagccgctcactggcgcaatcgggtgatgcagtcttgctg
tcgccagcctgcgccagtttcgacatgttcaaaaactacgaagagcgcggccagttgttc
gctcgcgccgtggaggtgctggcatga
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