Pseudomonas bubulae: V6B39_09075
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Entry
V6B39_09075 CDS
T10711
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pbub Pseudomonas bubulae
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
AAA_16
AAA_19
OKR_DC_1_N
AAA_22
MCM
TIP49
nSTAND3
AAA_18
APS_kinase
AAA_7
IstB_IS21
PIF1
Motif
Other DBs
NCBI-ProteinID:
WWR39557
LinkDB
All DBs
Position
complement(2012744..2014135)
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AA seq
463 aa
AA seq
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MSHNVLVVDDEPKLCDLLSSALSQNRIQVFTASNGLQALEVLEQEDIDLVISDWRMPGMD
GPQLLAEIKQRYPNLPVIVMTAYSTVKNAVQSIRNGAYDYIAKPFDIDELDITVSKALQF
RDILRDNARMRAELDEHQHIDSLIGDSPSFRRVLQAIDSVRESNATILLTGESGTGKEMV
ARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLQAVANKEFREDL
YYRLNVFPIPLPALRERVEDIASLARHFAHNLGATAGKRITGFSPSALQAMAQYSWPGNI
RELQNCVERATIVANSSTIQDSDLPPYLFSAQPGQSSALLAPGPSVPPDLEAALAEVEKA
YILSALQQANGVQAAAAQLIGISERSFWYRLKKLDIHVDKIVR
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtcataacgtgctggtggtcgacgatgagcccaaactctgcgacttgctcagctcg
gcactgagccagaaccggattcaggtcttcactgccagcaacggcctgcaggcacttgaa
gttctggagcaggaagatatcgacctggtgatcagcgactggcgcatgcccggcatggac
ggcccgcagttactggccgagatcaaacagcgttacccgaacctgccagtgattgtaatg
actgcctacagcacggtaaaaaacgccgtacagtccatacgtaacggcgcctacgattac
atcgccaagccctttgatatcgacgagctggatattacggtcagcaaagccctgcagttt
cgcgacattttgcgcgacaacgcgcgcatgcgcgccgagctggacgagcaccagcacatc
gacagcctgattggcgacagcccaagctttcgccgggtgctgcaggccatcgactcggta
cgcgagagcaacgccacgatcctgctgactggcgaaagcggtaccggcaaagagatggtc
gcccgcgccatccacaaacacggcagccgcgccgacaaaccctttgtcgcggtcaactgt
gcggcgattcctgaggggctgcttgaaagcgagatgttcggccaccgcaaaggcgcgttt
accggcgccgtagcagacagggtcgggcgctttatgcaggccgacaagggcaccctgttt
ctcgatgaagtgggcgatatgcccctggccttgcaggcaaaaatcctgcgggcgctgcaa
gaacgggtgatcgagccagtgggggatccgcgagagcgcaaggtggatgtgcgggtcatc
gccgcgaccaacaaaaacctgctgcaagccgtagccaacaaggagtttcgcgaagacttg
tattaccgcctgaacgtcttcccgattccgttgcccgcgttgcgcgaacgcgttgaagac
atcgcctcgctggcgcggcactttgcccataacctgggtgctaccgcaggcaaacgcatc
accggtttcagccccagcgccttgcaggcgatggcccagtacagttggccgggcaatatt
cgcgaactgcaaaactgcgtggagcgcgccaccattgtggccaatagcagcactatccag
gacagtgacctgccgccctacctgttcagtgcccaacccggccagagcagtgccttgctt
gcccccggaccgagcgtgccccccgacctggaagccgccttggccgaagtcgaaaaagcc
tacattctaagtgccctgcaacaggccaatggcgtacaggctgcggcggcgcagttaatc
ggcatatccgagcgcagcttctggtaccgcctgaaaaagctggatattcatgtcgataaa
attgtcaggtaa
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