KEGG   Pseudomonas bubulae: V6B39_09075
Entry
V6B39_09075       CDS       T10711                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pbub  Pseudomonas bubulae
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA AAA_16 AAA_19 OKR_DC_1_N AAA_22 MCM TIP49 nSTAND3 AAA_18 APS_kinase AAA_7 IstB_IS21 PIF1
Other DBs
NCBI-ProteinID: WWR39557
LinkDB
Position
complement(2012744..2014135)
AA seq 463 aa
MSHNVLVVDDEPKLCDLLSSALSQNRIQVFTASNGLQALEVLEQEDIDLVISDWRMPGMD
GPQLLAEIKQRYPNLPVIVMTAYSTVKNAVQSIRNGAYDYIAKPFDIDELDITVSKALQF
RDILRDNARMRAELDEHQHIDSLIGDSPSFRRVLQAIDSVRESNATILLTGESGTGKEMV
ARAIHKHGSRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLF
LDEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLQAVANKEFREDL
YYRLNVFPIPLPALRERVEDIASLARHFAHNLGATAGKRITGFSPSALQAMAQYSWPGNI
RELQNCVERATIVANSSTIQDSDLPPYLFSAQPGQSSALLAPGPSVPPDLEAALAEVEKA
YILSALQQANGVQAAAAQLIGISERSFWYRLKKLDIHVDKIVR
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgagtcataacgtgctggtggtcgacgatgagcccaaactctgcgacttgctcagctcg
gcactgagccagaaccggattcaggtcttcactgccagcaacggcctgcaggcacttgaa
gttctggagcaggaagatatcgacctggtgatcagcgactggcgcatgcccggcatggac
ggcccgcagttactggccgagatcaaacagcgttacccgaacctgccagtgattgtaatg
actgcctacagcacggtaaaaaacgccgtacagtccatacgtaacggcgcctacgattac
atcgccaagccctttgatatcgacgagctggatattacggtcagcaaagccctgcagttt
cgcgacattttgcgcgacaacgcgcgcatgcgcgccgagctggacgagcaccagcacatc
gacagcctgattggcgacagcccaagctttcgccgggtgctgcaggccatcgactcggta
cgcgagagcaacgccacgatcctgctgactggcgaaagcggtaccggcaaagagatggtc
gcccgcgccatccacaaacacggcagccgcgccgacaaaccctttgtcgcggtcaactgt
gcggcgattcctgaggggctgcttgaaagcgagatgttcggccaccgcaaaggcgcgttt
accggcgccgtagcagacagggtcgggcgctttatgcaggccgacaagggcaccctgttt
ctcgatgaagtgggcgatatgcccctggccttgcaggcaaaaatcctgcgggcgctgcaa
gaacgggtgatcgagccagtgggggatccgcgagagcgcaaggtggatgtgcgggtcatc
gccgcgaccaacaaaaacctgctgcaagccgtagccaacaaggagtttcgcgaagacttg
tattaccgcctgaacgtcttcccgattccgttgcccgcgttgcgcgaacgcgttgaagac
atcgcctcgctggcgcggcactttgcccataacctgggtgctaccgcaggcaaacgcatc
accggtttcagccccagcgccttgcaggcgatggcccagtacagttggccgggcaatatt
cgcgaactgcaaaactgcgtggagcgcgccaccattgtggccaatagcagcactatccag
gacagtgacctgccgccctacctgttcagtgcccaacccggccagagcagtgccttgctt
gcccccggaccgagcgtgccccccgacctggaagccgccttggccgaagtcgaaaaagcc
tacattctaagtgccctgcaacaggccaatggcgtacaggctgcggcggcgcagttaatc
ggcatatccgagcgcagcttctggtaccgcctgaaaaagctggatattcatgtcgataaa
attgtcaggtaa

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