Pseudomonas bubulae: V6B39_11055
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Entry
V6B39_11055 CDS
T10711
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00071
Fatty acid degradation
pbub00280
Valine, leucine and isoleucine degradation
pbub00310
Lysine degradation
pbub00362
Benzoate degradation
pbub00380
Tryptophan metabolism
pbub00410
beta-Alanine metabolism
pbub00640
Propanoate metabolism
pbub00650
Butanoate metabolism
pbub00907
Pinene, camphor and geraniol degradation
pbub00930
Caprolactam degradation
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01120
Microbial metabolism in diverse environments
pbub01200
Carbon metabolism
pbub01212
Fatty acid metabolism
Module
pbub_M00087
beta-Oxidation
pbub_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
Enzymes [BR:
pbub01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
V6B39_11055 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
V6B39_11055 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
V6B39_11055 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
V6B39_11055 (fadB)
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Other DBs
NCBI-ProteinID:
WWR39922
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Position
2421907..2424054
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AA seq
715 aa
AA seq
DB search
MIYEGKAITVTALESGIVELKFDLKGESVNKFNRLTLNELRQAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVENFKLPDAELIAGNLEANRIFSDFEDLNVPTVAAINGIALGGGLE
MCLAADFRVMADSAKIGLPEVKLGIYPGFGGTVRLPRLIGVDNAVEWIASGKENRAEDAL
KVGVVDAVVTADKLGAAALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFAKLAKTSASNCLIGLFLNDQEL
KKKAKIYDKIAKDVKQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAAKL
LVGRVDKGRMTPAKMAEVLNGIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVENHVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSDLAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFARLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAIDALYEAKRLGQKNGKGFYAYEADKKGKQ
KKVVDSSVLEVLKPIVYEQRDVTDEDIINWMMIPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPLFRGGALRYIDSIGVAEFVALADQYAELGALYHPTAKLREMAKNGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttacggctcttgaaagtggcatcgtcgaactc
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgtctaaccctgaacgaattg
cgtcaggcagtagatgcgatcaaggcagatgcttcggtcaagggtgtcatcgtttccagc
ggtaaagacgtgtttatcgtcggcgccgacatcaccgaattcgttgaaaacttcaaattg
ccggatgccgagctgattgccggcaacctggaagccaacagaatcttcagcgatttcgaa
gacctcaacgtacctaccgtcgcggccatcaatggcatcgcgttgggcggcggtctggaa
atgtgcctggcagccgacttccgggtcatggctgacagcgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggctttggcggcaccgtgcgtctgccacgcctgatcggc
gttgataacgcggttgaatggattgcttcgggcaaggaaaaccgcgcagaagacgctctg
aaagtaggtgtcgttgatgctgtggtcaccgctgacaagctgggcgcagctgccctggac
ctgatcaagcgcgccatcagtggtgagctggactacaaggccaagcgtcagccgaagctg
gaaaagctcaagctcaacgcaatcgaacaaatgatggcgttcgaaaccgcgaaaggtttc
gtggctggccaggccggcccgaactacccggccccggttgaagcgatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtggaagctgcaggttttgccaaa
ctggccaagacctccgcttcaaactgcctgatcggcctgttcctgaacgatcaggaactg
aagaaaaaagccaagatctacgacaaaatcgccaaagacgtgaagcaggccgccgttctg
ggtgcaggcatcatgggtggcggtattgcctatcagtcggcctccaaaggcacgccgatc
ctgatgaaggacatcaacgaacacggcatcgagcaagggctggctgaagccgccaagttg
ctggtgggtcgcgttgataaaggtcgcatgactccggcgaaaatggccgaagtactgaac
ggtattcgtcctactctgtcctacggcgatttcggcaacgtcgacctggtggtcgaagcg
gtagtcgagaacccgaaggtcaagcaagcggtactggcggaggtggaaaaccatgttcgc
gaagacgccatcctggcttccaacacttcgaccatttccatcagcctgctggccaaggcc
ctcaagcgtccggaaaatttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaagtgattcgtggcgagaagtccagcgacctggctgttgccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgcccgggctttttggtc
aaccgcgtattgttcccgtacttcggcggttttgcccgtctggtcagtgccggtgtcgac
tttgtgcgcatcgacaaagtaatggaaaaattcggctggccaatgggcccggcgtacctg
atggacgtggtcggcatcgacaccggccaccacggtcgcgacgtgatggctgaaggcttc
ccggaccgcatgaaagacgaccgccgctcggcgatcgacgccctgtacgaggccaagcgc
ctgggtcagaaaaacggcaagggcttctatgcctacgaggctgacaaaaagggcaagcag
aagaaagtcgttgattccagcgtacttgaagtgctcaagccaattgtttacgagcagcgc
gacgtgactgacgaggacatcatcaactggatgatgattccgttgtgtctggaaaccgta
cgctgcctggaagacggcatcgttgaaaccgcagccgaggccgatatgggtctggtctac
ggtattggcttcccgctgttccgtggcggcgcactgcgctacatcgattcgatcggtgtt
gcagagttcgtggccctggccgatcagtacgctgaactgggcgcgctgtaccacccgact
gcgaagctgcgtgagatggccaagaacggccagagcttcttcggttaa
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