Pseudomonas bubulae: V6B39_11650
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Entry
V6B39_11650 CDS
T10711
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00020
Citrate cycle (TCA cycle)
pbub00190
Oxidative phosphorylation
pbub00650
Butanoate metabolism
pbub00720
Other carbon fixation pathways
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01120
Microbial metabolism in diverse environments
pbub01200
Carbon metabolism
Module
pbub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbub_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pbub_M00149
Succinate dehydrogenase, prokaryotes
pbub_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6B39_11650 (sdhA)
00650 Butanoate metabolism
V6B39_11650 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
V6B39_11650 (sdhA)
00720 Other carbon fixation pathways
V6B39_11650 (sdhA)
Enzymes [BR:
pbub01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
V6B39_11650 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
DAO
Thi4
FAD_binding_3
Pyr_redox_3
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
WWR40036
LinkDB
All DBs
Position
2548303..2550078
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AA seq
591 aa
AA seq
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MANTVNTLSFDAIIIGGGGAGMRAALQLAQGGHKTAVITKVFPTRSHTVSAQGGITCAIA
SADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQR
PFGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKAGTVFLNEYYGVDLVKNEAGD
FVGMIVICIETGETSYVRANATVLATGGAGRIYSSTTNALINTGDGIGMALRAGVPVQDI
EMWQFHPTGIAGAGVLVTEGCRGEGGYLINKHGERFMERYAPNAKDLAGRDVVARSMVKE
IIAGNGCGPDGDHVMLKLDHLGEEVLHSRLPGICELSKTFAHVDPVLAPVPVVPTCHYMM
GGVATNIHGQAITQDADGNDQIIPGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGL
FLEQTLKEGVDYARPRQSDIDAALARLDGLNSRTDGEDVATLRKELQSCMQNYFGVFRTG
EYMQKGIAQLADLRKRIANVKINDKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESR
GAHAREDFEDRDDVNWLCHTLYFPGDKRVAKRAVNFSPKTVPTFEPMVRTY
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggctaacacagttaatacactttcgttcgacgccatcatcattggcggcggcggtgcc
ggcatgcgcgctgctctgcagctggctcaaggcggtcacaagactgctgtaatcaccaag
gttttcccgactcgttcgcacaccgtatcggcccagggtggcatcacctgcgcgatcgcg
tctgcagatccaaacgatgactggcgctggcacatgtacgataccgtcaagggttccgac
tatatcggtgaccaggacgctatcgaatacatgtgttccgtaggtccggaagccgtgttc
gagctcgagcacatgggtctgccgttctcccgtaccgaacagggtcgtatctaccagcgt
cctttcggcggtcagtccaaggacttcggcaaaggcggccaggctgcccgtacttgcgct
gcagccgaccgtaccggtcacgcgctgttgcacaccctgtaccaggccaacctcaaggcc
ggcactgtattcctgaacgaatactacggtgtcgatctggttaagaacgaggctggcgat
ttcgtcggcatgatcgttatctgcatcgaaacaggtgaaacctcttacgttcgcgctaac
gcgaccgtactggcgactggcggtgcaggccgtatctactcgtccaccaccaacgccctg
atcaacaccggcgacggtattggcatggctctgcgtgctggcgtgccggtacaggacatc
gaaatgtggcagttccacccgaccggtattgccggcgccggtgtactggttaccgaaggt
tgccgtggtgaaggtggctacctgatcaacaagcatggcgagcgtttcatggagcgttat
gctccgaacgccaaagaccttgctggtcgtgacgttgttgctcgctcgatggttaaggaa
atcatcgcgggcaacggttgcggtcctgatggcgaccacgtaatgctgaagctcgatcac
ctcggtgaagaagtgctgcacagccgtctgccaggtatctgcgaactgtcgaaaacgttc
gcacacgttgacccggtattggctccggttccagtggttccgacttgccattatatgatg
ggcggcgttgccaccaacattcatggtcaggcgatcactcaggacgccgacggcaacgac
cagatcatccctggcctgtttgcagtaggtgaagtggcttgcgtatccgtacacggtgct
aaccgtctgggcggcaactcgctgctcgacctggtggtattcggtcgtgctgccggcctg
ttccttgaacagacccttaaagaaggcgttgattacgctcgtccacgccagtccgacatc
gacgctgccctggcacgtctggacggcctgaactcgcgtaccgacggcgaagacgtggca
accctgcgtaaagagctgcaaagctgcatgcagaactacttcggtgtattccgtaccggc
gaatacatgcagaagggtattgcccagctggctgatctgcgcaagcgcatcgccaacgtg
aaaatcaacgataagagccaggcgttcaacacggcccgtatcgaagcccttgagctgcaa
aacctgctcgaagtggctgaagcgactgcaatcgctgctgaagttcgtaaggaatcgcgc
ggtgctcacgcccgtgaagacttcgaagatcgtgacgacgttaactggctgtgccacacc
ctgtacttcccgggtgacaagcgcgtagccaagcgtgcggtgaacttctcgccgaaaacc
gttccgaccttcgagccaatggttcgtacttactaa
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