Pseudomonas bubulae: V6B39_11865
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Entry
V6B39_11865 CDS
T10711
Name
(GenBank) NADP-dependent isocitrate dehydrogenase
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00020
Citrate cycle (TCA cycle)
pbub00480
Glutathione metabolism
pbub00720
Other carbon fixation pathways
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01120
Microbial metabolism in diverse environments
pbub01200
Carbon metabolism
pbub01210
2-Oxocarboxylic acid metabolism
pbub01230
Biosynthesis of amino acids
pbub04146
Peroxisome
Module
pbub_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pbub_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
V6B39_11865
09102 Energy metabolism
00720 Other carbon fixation pathways
V6B39_11865
09106 Metabolism of other amino acids
00480 Glutathione metabolism
V6B39_11865
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6B39_11865
Enzymes [BR:
pbub01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
V6B39_11865
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Motif
Pfam:
IDH
CAMP_factor
Motif
Other DBs
NCBI-ProteinID:
WWR35707
UniProt:
A0ABZ2GZR3
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All DBs
Position
complement(2601073..2603295)
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AA seq
740 aa
AA seq
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MPNRSKIIYTFTDEAPALATYSLLPIIEAFTASADIAVETRDISLAGRILSSFPEQLGDK
AVADHLAELGALAVTPEANIIKLPNISASVPQLQAAIKELQAQGFNIPDYPETVTTDAEK
EIKARYSKVMGSAVNPVLREGNSDRRAPLSVKNYARKHPHKMGAWAADSKSHVAHMSEGD
FYGSEKAALIEAPGSVKIELIAQDGTTTVLKEKTAVQAGEIIDCSVMSKKALREFVAAEI
EDAKKQGVLFSVHLKATMMKVSDPIMFGQIVAEFYKDALEKHADVLKEIGFNLNNGIGDL
YARIKALPAEKQAEIEADIEAVYANRPALAMVNSDKGITNLHVPSDVIVDASMPAMIRDS
GKMWNTEGQLQDTKAVIPDRCYATIYQATIEDCKKHGAFDPTTMGSVPNVGLMAQKAEEY
GSHDKTFQIKTSGVVRVTDSNGNVLMEQNVEEGDIWRMCQAKDAPIRDWVKLAVNRARAS
NTPAVFWLDPKRSHDAEMIKKVETYLKDHDTSGLDIRIMAPVEAMKFTLERTRAGLDTIS
VTGNVLRDYLTDLFPIMELGTSAKMLSIVPLMNGGGLFETGAGGSAPKHVQQLLEENFLR
WDSLGEFLALAASLEHLGTTYNNPKALVLAKTLDQATGQFLDNNKSPSRKVGNIDNRGSH
FYLALYWAQALAAQTEDKELQAQFAPVAKAMAENEAKIVAELNAVQGKPVDIGGYYHADA
DKVSKVMRPSATLNAIIASV
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaccgttcgaagatcatctataccttcaccgacgaagctccggcgctcgccacc
tattcactgctgcctatcatcgaggcgtttaccgccagcgccgatatcgccgttgaaacg
cgcgacatctctctggctggccgcatcctctcaagcttccccgagcaattgggtgacaag
gctgtagcagaccacctcgccgaactgggcgccctggccgttacccctgaagccaacatc
atcaagctgcccaatatcagcgcctcggtcccgcagttgcaggccgcgatcaaagaactg
caagcgcagggcttcaacatcccggactacccggaaaccgtcaccactgacgctgaaaaa
gaaatcaaggcgcgttacagcaaagtgatgggcagtgccgtaaacccggtactgcgcgaa
ggcaactccgaccgccgcgcaccgctgtcggtcaagaactacgcgcgcaagcacccgcac
aaaatgggcgcctgggctgcagactccaagtcccacgttgctcacatgagcgaaggcgac
ttctacggcagcgaaaaagccgccctgatcgaagcaccgggcagcgttaaaatcgaactg
atcgctcaagacggcaccaccaccgtcctgaaagaaaaaaccgccgtccaggctggtgag
atcatcgattgctcggtcatgagcaaaaaagccctgcgcgagttcgtagcggccgaaatc
gaagacgccaaaaagcagggcgtactgttctcggttcacctgaaagccaccatgatgaag
gtttccgacccgatcatgtttggtcagatcgtggccgagttctacaaggatgcgctggaa
aaacacgctgacgtcctcaaagaaatcggtttcaacctgaacaacggcatcggcgacctg
tacgcccgcatcaaggcgctgccagccgagaagcaggctgaaatcgaagccgacatcgaa
gccgtgtacgccaaccgccctgcgctggccatggtcaactccgacaaaggcatcaccaac
ctgcacgtgccgagcgacgtaatcgtcgacgcctcgatgccggccatgattcgtgattcc
ggcaagatgtggaacaccgaaggccagctgcaagacaccaaggccgtgatcccggatcgc
tgctacgccaccatctaccaggccaccatcgaagactgcaagaaacacggcgccttcgat
ccgaccaccatgggcagcgtgccaaacgttggcctgatggcgcaaaaagccgaagagtac
ggttcccacgacaagactttccagatcaagacctcgggcgttgtgcgggtaactgacagc
aacggcaacgtgctgatggaacagaacgtcgaggaaggcgatatctggcgcatgtgccag
gccaaagacgcgccgatccgcgactgggtcaagctggccgtcaaccgtgcccgcgccagc
aacactccggccgtgttctggctcgatccaaagcgtagccacgacgccgaaatgatcaaa
aaggttgaaacctacctgaaagatcacgacaccagcggcctggacattcgcatcatggcg
ccggtagaggccatgaagttcactctggagcgcacccgcgctggcctggataccatctcg
gtaaccggcaacgtgctgcgtgactacctgaccgacctgttcccgatcatggaactgggc
accagcgccaaaatgctgtcgatcgtaccgctgatgaatggcggcggcctgttcgaaacc
ggcgccggcggctcggccccgaagcacgttcaacagttgctggaagaaaacttcctgcgc
tgggactcgctgggtgagttcctggcactggcggcttccctggagcacctgggcacaacc
tacaacaacccgaaagcgttggtgttggccaagaccctggaccaggctaccggtcagttc
ctcgacaacaacaaatcgccatcgcgcaaagtcggcaacatcgacaaccgcggtagccac
ttctacctggcgctgtactgggcacaagccctggctgcccagactgaagacaaagagctg
caagcccaatttgctccagtagcaaaagccatggccgagaacgaggcaaaaatcgttgcc
gaactcaacgccgtgcagggcaagccggtcgatatcggtggttactaccacgccgatgcc
gacaaggtaagcaaagtaatgcgccctagcgccacactgaacgcgatcatcgcttcggtg
taa
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