Pseudomonas bubulae: V6B39_12220
Help
Entry
V6B39_12220 CDS
T10711
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
pbub Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbub03036
]
V6B39_12220 (smc)
Chromosome and associated proteins [BR:
pbub03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
V6B39_12220 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
SMC_hinge
AAA_15
AAA_29
BORCS7
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WWR35776
LinkDB
All DBs
Position
2696641..2700129
Genome browser
AA seq
1162 aa
AA seq
DB search
MRLTCIKLAGFKSFVDPTTVTFPSNMAAVVGPNGCGKSNIIDAVRWVMGESSAKNLRGES
MTDVIFNGSTTRKPVSQASIELVFDNSDGTLLGEYAAYAEISIRRKVTRDSQTTYYLNGT
KCRRRDITDIFLGTGLGPRSYSIIEQGMISKLIESKPEDLRNFIEEAAGISKYKERRRET
ENRIRRTHENLARLTDLRDELGRQLERLHRQAQAAEKYQEYKAEERQLKARLSALRWQAL
NEQVGQREAVIGNQEVSFEALVAEQRNADASIERLRDGHHDLSERFNLVQGRFYSVGGDI
ARVEQSIQHGQQRLRQLQDDLREAERSRLETESHLGHDRTLLATLAEELHMLEPEQELTS
AAAEEAAATLEVAEQTMHGWQEQWDIFNLRSAEPQRQSEVLQARIQQLETSMERVAERQR
RLAEERALLAADPEDAAILELSEQLASSEMAHEELQASEQQLVEQLEQVRHDLQQATQNQ
QQAQGELQRLNGRLASLEALQQAALDPGTGTGEWLRDQQLAEQPRLAEGLRVEAGWELAV
ETVLGADLQAVLVEDFARLDLAGFAQGDLRLFSDAGQAPRLAGSLLDKVTADFDLAPWLG
QVKPVETLEQALALRAQLAEGQSLISRDGYWVGRNFLRVRRASEAESGVLARGQEIQRLG
LECEEREATLAALEEQLQSMREQQRMQEDSREQLRRRLQDEARHQGEIKAKLSASKAKVE
QLTLRRRRLDEELAELGEQRALEHEQVGEARLLLQDALDAMATDTGQRELLLARRDSLRE
QLDRVRQDARQHKDHAHQLAVRLGSLKAQHDSTRQALERLEMQAERLAEKREQLTLNLEE
GEAPLEELRLKLEELLDKRLSVDEELKIAQTALEDADRELRDAEKRRNQAEQQSQLIRGQ
LEQQRMEWQALSVRRTALQDQLLADGYDLHGVLATLDAEVNEQQAEEELERIAARIQRLG
AINLAAIDEYQQQSERKRYLDAQDADLVEALDTLENVIRKIDKETRSRFKDTFDQINGGL
QALFPKVFGGGSAYLELTGEDLLDTGVTIMARPPGKKNSTIHLLSGGEKALTALALVFAI
FKLNPAPFCMLDEVDAPLDDANVGRYARLVKEMSQTVQFIYITHNKIAMEMADQLMGVTM
HEPGCSRLVAVDVEEAMAMVDA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcctgacctgtatcaagctggccggcttcaagtccttcgttgacccgacaaccgtt
acctttccaagcaatatggcggcggtggtaggccccaacggctgtggcaagtccaatatc
atcgatgccgtgcgctgggtcatgggcgaaagctcggccaagaacctgcgcggcgagtcg
atgaccgacgttatcttcaacggctccaccacgcgcaaaccggtgagccaggccagtatc
gaactggtcttcgacaactccgacggcacgctgctgggcgagtatgcggcctatgccgag
atatcgatccgccgcaaagtcacccgcgacagccagaccacctattacctcaatggcacc
aagtgccgtcgtcgtgacattaccgatatcttcctcggtacggggctggggccgcgcagc
tactcgatcatcgagcagggcatgatctccaagctgatcgagtccaagcccgaagatctg
cgcaactttatcgaagaggcggcgggcatttccaagtacaaggagcgccgccgcgagact
gaaaaccgtatccgccgtacccacgaaaaccttgcccgtctgactgacctgcgcgatgag
ctggggcgtcagctggagcgtttgcaccgccaggcccaggccgccgagaaatatcaggaa
tacaaggccgaagagcgtcagctcaaggcccggctgtcggctctgcgctggcaggccctg
aatgagcaggtggggcagcgcgaagcggtcatcggtaatcaggaagtcagtttcgaagcc
ctggtggccgagcagcgcaatgccgatgccagcatcgaacgcctgcgtgacgggcaccat
gatctgtcagagcgcttcaatctggtgcaggggcgcttctattcggtagggggcgatatt
gcccgggtcgagcagagcattcagcatggccagcaacgtttgcgccagttgcaggatgac
ctgcgcgaagccgagcgctcgcgcctggaaaccgaatcccatctggggcatgaccgcacc
ttgctggcgactctggctgaagagctgcacatgcttgagcccgagcaggaactgaccagc
gcggccgccgaagaggctgccgctactctggaagtggccgagcaaaccatgcatggctgg
caggagcagtgggacattttcaaccttcgctcggccgagccgcagcgccagtccgaagtg
ctgcaagcccgtatccagcagctggaaaccagtatggagcgcgttgcggaacgtcagcgc
cgcctggctgaagagcgtgccttgctggccgcagaccctgaagatgcggccattctggag
ctcagtgagcaactggccagcagcgaaatggcccacgaagagctgcaggccagtgagcag
caactggtcgagcagctcgagcaagtgcgtcacgacttgcaacaggccacgcagaaccag
cagcaggcccagggcgagctgcagcgcctcaacggtcgtctggcatcgctggaggccttg
cagcaggctgcgcttgatccgggtaccggtactggcgaatggttgcgcgatcagcagctt
gccgagcagccacgactggcagaaggcctgcgcgtagaggctggctgggagctggcggta
gagaccgtgttgggggctgatttgcaggccgtactggtcgaggattttgcccggctggat
ctggcagggtttgcccagggtgatttgcgcctgttcagtgatgcagggcaggcccctcgc
ttggcgggcagcctgcttgacaaggtcacggccgattttgatctggcgccgtggctgggc
caggtcaaaccggtcgaaacactggagcaggcactggccttgcgtgctcaactggccgag
ggccagagcctgatcagccgtgatggctattgggtcgggcgcaacttcctgcgggtgcgc
cgcgccagtgaagccgaaagcggggtgctggcccggggccaggaaatccagcgcctgggg
cttgagtgcgaagagcgtgaagccaccctggcggccctggaggaacaactacaaagcatg
cgtgagcaacagcgtatgcaggaagactctcgtgagcagcttcgccgtcgcttgcaggat
gaagctcgccaccagggtgagatcaaggccaagctctccgccagcaaggccaaggtcgag
caattgaccttgcgccgccgccgtctggacgaagaactggccgagttgggtgagcagcgc
gccctggagcatgagcaggtaggggaggcgcgcctgctgttgcaggacgccctggatgcc
atggccaccgataccgggcagcgcgagctgttgctggcccgtcgcgacagtctgcgcgag
cagttggatcgggtgcgtcaggatgctcgacaacataaagaccacgcccaccagttggct
gtccgcctggggtcgctcaaggcgcagcatgattccacccgccaggctcttgagcgcctg
gaaatgcaggccgagcgcctggctgaaaagcgcgaacagctgaccctcaatctggaggag
ggcgaagcgccgctggaagagttgcgcctcaagcttgaagagttgctcgacaagcgcctg
agcgtggatgaagaactcaagattgcccagaccgcgctcgaagatgccgatcgcgaattg
cgcgatgccgaaaaacgccgcaatcaggctgagcaacaatcgcaattgattcgtggccag
ctcgaacagcagcgcatggagtggcaggccttgagcgtgcgtcgtactgcgttgcaggat
cagttgctggccgatggctatgacctgcacggggtgctggccaccctcgatgccgaggtc
aacgagcagcaggccgaagaagaactggagcgtatcgctgcgcgaattcagcgcctgggc
gcgatcaaccttgcagccattgatgagtatcagcagcaatcggagcgcaagcgctatctg
gatgctcaggatgctgatctggtcgaggcactcgataccctggaaaacgtcatccgcaag
atcgacaaagagacccgcagccgcttcaaggacacctttgatcagataaatggtggatta
caggcacttttcccaaaagttttcggtggcggcagcgcttatttggaactgacgggcgaa
gatctactcgatacaggggtgaccatcatggcgcgtccgccgggcaagaagaacagcacg
atccatttgctgtccggtggcgagaaagccttgacggccctggcgctggtttttgccatt
ttcaagctcaacccggcgccgttttgcatgctcgacgaagtcgatgcaccgcttgatgac
gctaacgtaggccgctatgcacgcttggtaaaggagatgtcgcagaccgtgcaatttatc
tatatcactcacaacaagatcgccatggagatggcggatcagttgatgggggtgacgatg
catgagccgggctgttcacgtcttgtagcggttgatgttgaggaggcaatggcaatggtc
gatgcttga
DBGET
integrated database retrieval system
