Pseudomonas bubulae: V6B39_12240
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Entry
V6B39_12240 CDS
T10711
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub03030
DNA replication
pbub03430
Mismatch repair
pbub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6B39_12240 (dnaX)
03430 Mismatch repair
V6B39_12240 (dnaX)
03440 Homologous recombination
V6B39_12240 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbub03032
]
V6B39_12240 (dnaX)
03400 DNA repair and recombination proteins [BR:
pbub03400
]
V6B39_12240 (dnaX)
Enzymes [BR:
pbub01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6B39_12240 (dnaX)
DNA replication proteins [BR:
pbub03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V6B39_12240 (dnaX)
DNA repair and recombination proteins [BR:
pbub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V6B39_12240 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
ResIII
TIP49
AAA_30
AAA_18
PIF1
AAA_2
AAA_19
TsaE
DUF3646
nSTAND3
AAA_7
HasA
Rad17
zf-CXXC
Mg_chelatase
SKI
AAA_24
Herpes_Helicase
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WWR35779
LinkDB
All DBs
Position
2704290..2706341
Genome browser
AA seq
683 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDSQRLHHAYLFTGTRGVGKTTIARIIAK
CLNCETGITSTPCGECSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLTHVLSVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAGDVRAM
LGTLDHGQVFDLLHALIEGDARAMLEAVRHLAEQGPDWNGVLSEILNVFHRVAIAQALPE
GVDNGHGDRDRVLALAKALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADTGNAPSQPLKPVGISQATVDSAPTVAAMSPVEPVPAAPAPVAVQPVPPVVEAVAEPVQ
APKAPSVAEKDLPWNEPAAPVIELKVAPESVLDTIGEPPELPPMPLPTPDSVVPDAPEWI
AAPLPEPTVEQVDAAVSGMDRDDEPPLDEDYIEPDMDSAAYSYLDELASEHASEPAPAPE
PLPAAMPATGLALEWLEMFPKLPVSGMTASIGANCTLIAVDGDDWLLHLDPAHSALFNLT
QQRRLNDALNQFTQRTLKVTIELVKPEQETPAQAASRFRAERQRLAEESIHADPVVRQMV
EQFGAAVREDTIQPLEVAQAQVS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttcttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccatgtgctcaaggctctgatcaatgccctggacagtcagcgcctgcaccacgct
taccttttcaccggtacccgtggcgtcggcaagaccaccattgcgcggatcatcgccaaa
tgcctgaactgtgaaacaggtatcacctcgactccctgtggcgagtgctccgtgtgccgt
gaaatcgatgaagggcgctttgtcgacctgatcgaaatcgacgccgccagccgcaccaag
gtcgaggacacccgcgaactgctcgacaacgtgcagtacgcgccgagccgcgggcgcttc
aaggtctacctgattgacgaagtgcacatgctctccagccattcgttcaatgcgctgctc
aagacccttgaagagccgccgccttacgtcaagttcatcctcgcgaccaccgacccgcag
aaattgccggccacgatcctgtcgcgctgcctgcagttttcgctgaagaacatgacgccc
gagcgcgtggtcgagcatttgacccacgttctcagtgtcgaaaatgtgccgtttgaagat
gatgcgctgtggctgctcggtcgcgccgccgatggctcgatgcgtgatgccatgagcctc
accgatcaggccattgccttcggtgagggcaaggtactggcgggtgatgtgcgggcgatg
cttggtacgctggatcacggtcaggtgttcgacctgttgcacgccttgatcgaaggtgat
gccagggccatgctcgaggccgttcgccatctggccgagcagggcccggactggaatggc
gtgctgtccgagatcctcaacgtcttccatcgcgtggccattgcccaggcgctgcccgaa
ggcgtcgataatggtcacggcgaccgcgatcgcgtcttggccctggccaaggcattgcct
gccgaagatgtgcaattttattaccagatgggcctgattggccggcgcgatttgccgctg
gcgccagatccgcgtggtggctttgaaatggtcctgctgcgaatgctggccttccgcccg
gcagacaccggcaacgcgccgagtcagccgctaaagccagtggggatcagccaggccaca
gttgattccgccccaaccgtggcggccatgtcccctgtcgagccagtgccggccgcgccg
gcaccggtggcagtgcaaccggtaccgcctgtggtcgaagcggttgccgagcctgtgcag
gcgcccaaggctccgtcagtggcggaaaaggacttgccctggaacgagccggctgccccg
gtgattgagctcaaggttgcgcccgagtcggtgctggacactattggcgagcctcctgag
ttgccgccgatgccgctgccgacgccggacagtgtggtgccggatgcgccggagtggatc
gcggcgccgcttccagagccgaccgtcgagcaggtggacgcagcggtgtcgggcatggat
cgtgacgacgagccgcccctggacgaagactacattgagccggacatggattcggcggcc
tacagctacctcgacgagctggccagtgagcatgccagcgagcctgcgcctgcgcccgaa
ccgctgcctgcggcgatgccggcgaccggtctggcccttgaatggctggagatgttcccc
aaattaccggtgtcgggcatgaccgccagcattggcgccaactgcacgctgattgcagtt
gacggtgatgactggctgttgcatctggacccggcccacagcgcgttgttcaacctgacc
cagcagcgtcgactcaacgatgcactgaaccagttcactcagcgtacactcaaagtcacg
attgagctggtcaagccggagcaggaaaccccggcccaggcggcttcgcgttttcgcgca
gagcgccagcgtctggccgaagagtcgatccatgccgacccggtggtccggcagatggtc
gagcagttcggtgcggccgtacgcgaagatacgattcaacctttagaggtggctcaggct
caagtgtcgtaa
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