Pseudomonas bubulae: V6B39_12265
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Entry
V6B39_12265 CDS
T10711
Symbol
hemN
Name
(GenBank) oxygen-independent coproporphyrinogen III oxidase
KO
K02495
oxygen-independent coproporphyrinogen III oxidase [EC:
1.3.98.3
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00860
Porphyrin metabolism
pbub01100
Metabolic pathways
pbub01110
Biosynthesis of secondary metabolites
pbub01240
Biosynthesis of cofactors
Module
pbub_M00121
Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
V6B39_12265 (hemN)
Enzymes [BR:
pbub01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.98 With other, known, physiological acceptors
1.3.98.3 coproporphyrinogen dehydrogenase
V6B39_12265 (hemN)
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Motif
Pfam:
Radical_SAM
HemN_C
Motif
Other DBs
NCBI-ProteinID:
WWR35784
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Position
complement(2709054..2710436)
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AA seq
460 aa
AA seq
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MLDAIRWDPELIRRYDLAGPRYTSYPTAMQFNSQVSPFDLLHALRESRKALRPLSLYVHV
PFCANICYYCACNKVITKDRGRAQPYLQKLEQEIQMIACHLDPRQKVEQLHFGGGTPTFL
SHDELRQLMAKLRQQFNLLDDDSGDYGIEIDPREADWSTMGLLRELGFNRVSIGLQDLDP
DVQRAVNRLQSLEETRAVIDAARTLQFRSINIDLIYGLPKQTPEAFARTVEEVISLQPDR
LSVFNYAHLPERFMPQRRINTSDLPSPAAKLQMLERTIEQLTGAGYRYIGMDHFALPDDQ
LAIAQEESTLQRNFQGYTTHGHCDLIGLGVSAISQIGDLYCQNDSDLAKYQHTLASGQLA
TSRGLVCNQDDRIRREVIQQIICNLHLPFATVEQAFNIDFRGYFAPQWPTLKTMAADGLI
ALDDQQLTVLPAGRLLVRSVCMVFDAYLEQQTRQRYSRVI
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgccattcgttgggacccagaattgatccgccgctacgatcttgccggaccg
cgctacacctcatacccgacagccatgcagttcaacagccaggtcagcccgttcgacctg
ctgcacgccctgcgcgaaagccgcaaggctctgcgcccgctgtcgttgtatgtgcacgtg
ccgttttgcgccaatatttgctattactgcgcctgcaacaaggtcattaccaaagaccgt
ggccgggcccagccctacctgcagaaactcgagcaggaaatccagatgatcgcctgccac
ctcgaccccaggcagaaggtcgagcaactgcactttggcggcggcaccccgacttttctt
agccacgacgaattgcgccaactgatggccaagctgcgtcagcaattcaatctgctggac
gacgactccggcgactacggcatcgaaatcgacccccgcgaagccgactggtcgaccatg
ggcctgttgcgtgaactgggcttcaaccgtgtcagcatcggcctgcaagacctcgacccg
gacgtgcaaagggcggtcaatcgcctgcaaagcctggaagagacccgggcagtgatcgac
gctgcacgcacgctgcaatttcgctcgatcaatatcgacctgatctacggcctgcccaag
cagaccccggaagcctttgcccgcaccgttgaagaagtgatcagcctgcagcccgatcgc
ctgtcggtgttcaactacgcgcacttgcctgaacgtttcatgccccaacgacgcatcaac
accagcgacctgccctcgcctgccgccaagctacagatgctggagcgcaccatcgagcaa
ctgaccggcgccggctaccgctatatcggcatggatcatttcgccctgccagacgatcaa
ctggccatcgcccaggaagaatcaaccctgcaacgcaacttccagggttataccacccac
ggccattgcgacctgatcgggcttggtgtctccgccatcagccagatcggcgacctgtac
tgccaaaatgacagcgacctggccaaataccagcacaccctggccagcggccagctcgcc
accagccgtggcctggtatgcaatcaggatgaccgtatccgtcgcgaggtcatccagcag
atcatctgcaatttgcacctgccgttcgcgaccgtggagcaggcgttcaatatcgacttt
cgcggctattttgcccctcagtggccgacgctcaagaccatggccgccgacggcctgatc
gccctggacgaccagcaactgactgtgctgcctgctggcaggctgctggtgcgctcggtg
tgcatggtgttcgacgcttaccttgagcaacaaacccgtcagcgctattcgcgggtgatc
taa
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