KEGG   Pseudomonas bubulae: V6B39_14305
Entry
V6B39_14305       CDS       T10711                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pbub  Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:pbub00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pbub03400]
    V6B39_14305
Enzymes [BR:pbub01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     V6B39_14305
    5.6.2.6  RNA 3'-5' helicase
     V6B39_14305
DNA repair and recombination proteins [BR:pbub03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    V6B39_14305
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WWR36168
UniProt: A0ABZ2GZW8
LinkDB
Position
complement(3151980..3154211)
AA seq 743 aa
MNLPPSSSESSSFSLLDSRIKRWIWAEGWTSLRDAQEQAIAALVGADQDVIIAAATAAGK
TEAAFLPILTHLLNHPDIPGAVLYISPLKALINDQWERLGRLCEQLDIPVIAWHGDISAN
KKHRFLKSPEGVLLITPESLEALFVNRGSNMGALFKNLRYIVVDELHAFIGSERGKQLQS
LMHRVELVVGRHLPRVGLSATLGDMKMASNFLCPRRAEGVTVIESKNAGQTLQIQVKGYI
QPPMCKLLEGRDKLESASDDEPEDQHSPDFAIAEHLYKVLRGSNNLVFPNSRTQVESFAD
RLRRCCERDAVPNEFWPHHGSLSKDLREQAEHALKSGEFPATGICTSTLELGIDIGSIKN
VVQIGCPPSVASLRQRLGRSGRRPGEPAILRAYCKEQPLTASSDLSDRLRQGLVQTIAMI
RLLTQSWFEPPRTQGVHASTLVQQCLSIIAQCGGATAPELWRRLVADGAFTRIEKADFVE
LLKNLGAKELITQESSGLLLPGVIGERLINHYEFYSAFSSDEEFRLVCAGKPLGSLPVSR
PLAKDQRIIFGGRRWQVQDVDLEAKIITVSPSRGGAPPYFEGLGAMIHDRVRQEMRALLA
ESTPCPFIDRTAQALLDEARQTFAALGLSQRHILLTGDTCQIVSWLGDHANDALCLLLNH
VGLRCEGDGLLISTNAKSDKMMWALEQVAALDASDLKTLLADVENMRREKWDWALPESLL
VKSYASISLDIGTAIAFAKAQTL
NT seq 2232 nt   +upstreamnt  +downstreamnt
atgaacttgccaccttcgagctctgagtcttcctctttcagccttctcgactccaggatt
aaacgctggatctgggctgaaggctggacatcgctaagggatgcccaagagcaagccata
gctgctctggtaggcgctgatcaagatgtcatcattgctgcagccactgcggcgggtaaa
accgaggctgctttcctgcctattctgacgcacctgctcaatcatcccgatatacccgga
gccgtgctgtatatcagccccctcaaagccctgattaacgatcaatgggagcgcctgggt
cgtctgtgcgagcaactggacatcccggtaattgcctggcacggagacatttcggcgaac
aagaaacatcgattcctgaaatcgcctgaaggtgttttgctcatcacgccagaatcgctg
gaagctcttttcgtgaaccgtggttccaacatgggcgccctattcaaaaatctgcgttac
atcgtagttgacgaattacatgcgtttataggcagtgagcgcggcaaacaactgcaatca
ctgatgcaccgtgtagaacttgtcgtcggtcgacacttgccgagagtgggcctgtcggca
acgctgggtgatatgaagatggccagcaactttctttgccctcggcgtgccgagggggtc
acggtcattgaatccaaaaacgcggggcagacgctgcagatccaggttaaaggctatatc
cagccacccatgtgcaagttgctcgaaggccgggataaacttgaatcggcctctgatgat
gagcctgaagaccagcactcccctgacttcgcaatcgccgagcatctttacaaggtgctc
aggggcagtaacaacttggtattccccaatagccgtacccaggttgagtctttcgctgat
cgacttagacgatgttgtgagcgcgatgccgtacccaatgagttctggcctcaccacggc
agcctgtccaaagatctgcgcgaacaagccgagcacgctttgaaatccggggagtttccc
gcaacaggcatctgcacatcgacccttgagctgggcatcgatattggctcaatcaagaat
gtcgtgcagattggctgcccgccctctgtcgccagcctgcgtcaacgcctggggcgctcc
ggcaggcgcccgggcgaacctgctattttgcgggcttactgcaaagaacagccgttaaca
gccagctccgacctttcagatcgattacgccaggggcttgtacagaccattgccatgatt
cgcctgctcacacaatcatggttcgaacctccgcgcactcaaggtgtgcatgcgtccaca
ttggttcagcaatgcctttccatcattgctcaatgcgggggggccactgcccccgagcta
tggaggcgcctggttgcagacggtgcgttcacccggattgaaaaggcagactttgttgaa
ctgctgaaaaaccttggtgcaaaagaacttatcacccaggaaagttcaggcctgttgctg
ccgggagtcattggcgagcgattgatcaaccattatgagttttacagcgccttcagcagt
gatgaggagtttcgcctggtgtgtgcaggcaagcctttgggttcgttaccggtcagccgc
ccgctggccaaggatcagcgaatcatcttcggcgggcgtcgctggcaagttcaggacgtt
gaccttgaggccaagatcattaccgtttccccctcacggggtggtgctcccccctatttt
gaagggctgggtgcaatgattcatgatcgggtgcgccaagaaatgcgcgcactgctggct
gaaagcaccccgtgcccttttattgatcgcacggcccaggcgttactggacgaagcacgc
cagacttttgctgcgcttgggctgtcgcagcgacatatcctgctgacaggcgacacatgc
cagatcgtaagctggctgggtgatcacgccaatgacgccctgtgcttgctgcttaatcac
gtagggctgcgttgtgagggggacggtttattgatttcaaccaacgccaagagcgacaag
atgatgtgggcacttgaacaggttgcagcgctggacgccagcgacctgaaaacgttgctg
gccgatgttgagaatatgcgacgagaaaaatgggactgggcactgcctgagtcgctgctg
gtaaagtcttatgcttccatctctctggatatcgggacggccatagcctttgcaaaggct
caaactctttga

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