Pseudomonas bubulae: V6B39_18020
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Entry
V6B39_18020 CDS
T10711
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pbub Pseudomonas bubulae
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GFIT
Other DBs
NCBI-ProteinID:
WWR36857
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Position
complement(4019495..4025761)
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AA seq
2088 aa
AA seq
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MRFFTDLIEQSLNRTREATLGVLGVNEPGLRRHLNEKMVDELGADGCFLAPPVFEHTFGW
KESEKRLLDLEGSLLSKSLLNTLQNAHAYDFPREAHPYTHQLQAWRTLLNEKPRSAIITS
GTGSGKTECFMVPILEDLIRERERNQSSLIGVRALFLYPLNALINSQQERLDAWTRAYGK
DIRFCLYNGKTEEREGVIRKIQEQKPNQVLSRELLRKEPAPILMTNATMLEYMLVRQVDN
PILEISKQQQSLRWIVLDEAHTYVGSQAAEMSLLLRRVVQAFGKDPEEIRFVATSATIAG
GEAEEKLKRYLADLAGVRLEQVDVIGGSRVWPDILFDSKVEKASLEVVQSIEDKQEISPT
RFDSLGRNSIARSLRHAIVNSTKPLDLNELLTILKSELMPGSRLEQQREVLGWLDVSTGT
RRHKDEPPFLKLRTHLFQRMLHGLWSCIDPNCTAKSASLSEWPFGNVYVHQRARCECNAP
VYELGFCDDCKTPHLIAEDRNGVLHQLSPYAGDEFSLSYESGEEETSPEREATGPTTSRA
YAQRLVIAGLQVAQDPFFSVSLDLDTHGLCATNSARPINITIAEEKAACCSHCDHELPNK
KSFLRKAYLGAPFYVANAVPTVLEFCPDADKKDSNERSPEELPGRGRKLITFTDSRQGTA
RMAVRMQQEAERSRLRGLVFETLRNVQAKADAEPKDVPTGDYDLLMHQAEGLEQSGMGVM
AAELRRKAAALRSGSALQKRIVSVDWASMVYELAASKDVEQSILRYNRYANPVLFDGSQG
GATMARLLLAREFSRRPKNQNSTETLGLVKVTYRGLKEISSTPPMWTETKAVPATGAFSV
PETRLTLEDWQDYLKVALDFYVRENTFINMDRDMQSWMGSRFTPKSLFSPKIEMEESTTV
KKWPQIKSGNPHRLVKLLEQATGLNRTVATDADKINAWLEAAWSALTQALILEPADPGHR
LKLETLTFSLLEEGWLCPITHRIFDSTFRGLTPYLPIKLRPQDYRCQKIQLASLANLQID
GSAVTKQLQIRSQVLQDPVIQHLRSENLWTDISDRTVEGGFYYRTAEHSAQQSAQRLDDY
VDLFKKGDINVLNCSTTMEMGVDIGGISAVVMNNLPPHPANYLQRAGRAGRRSEARAIAY
TLCKADPHNQRAFAQPKWPFITAIPAPTITLSSSRIVRRHVNSLLLSIFLKSKTSSDGDR
TRLTLQWFFGGDDSPCQQFKSWLTSCQAEFADPIKRLVSGTCLDGCLLSTISAETQESVR
ILEDRWLEESRKLNAKLQAATDLPYKKALELEKKRHDGEYLLRDLASRAFLPGYGFPTDV
VTLNTYNIEDFRHQRTHPESREDSIFNNKELPSRGLNIAIREYAPGSQVVIDGRVYRSAG
ISLQWHSSGQVNEAQKFDIAWRCSNCGATGVIENAYTNSSELTCSHCMHAIQPSERRTVL
RPGGFVTDFYESTTNDITSQKFIRVERPRIQLTGETISLPDKRCGFVRFGHDGSVFHHSS
GEHEKGYAVCLTCGRADSMLASGDIPKNLLPDQLHRPVGGITGSRKEFDCPGTAVKPNLF
LGYQIRTDVMELYLRSPQTGLWLGDSLAEQIIATTLAVALRDVIAELLGIASTEMGFGFR
LDRDIESGQERTVIQLFDEVSGGAGFVLAGLANTTELLRKALGKLHCPVNCENVCSHCLA
GQDSRVEREELDRGRAMEWLTVSGLIEHLDLPCEFETVVGASYCSTGPIRYLSSAINSAD
RSENDTSICLVMRGDAEDWDLDHPYFREKILTWAIADKLKVKLAIPSGASLSKAQKNTLF
DLASLGVVIEDMDNTLPPIKPYLVAQIRSKSGIKSLFSSDASAATPGVGWLSSNDGIVWA
GSNCVSDCGGQPIDVRTWRQFEQGARVIEITHELDGPISSLHRRLATLIEKHAPELTELI
ATDQATVVSYSDRYLKSPWSLMLLSGFLELFKNEKLESLRIQTLASSGDQSSNQISHDWR
FQLDQEALLKLWLGSQFSISPEIEIKERSRELQHARVITVDWVSGKRSKVFLDQGMGYWR
GKLPYRDQMGFDFRANHESQALQMLEKYKMAQMSPNGDWPTYMSLLVS
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttcttcacggatttaattgagcaaagccttaaccgcacgcgggaagcaacccta
ggtgtcctaggagttaacgaaccggggcttcgccgtcatctgaacgaaaaaatggttgat
gaattgggggccgatggctgttttttggctccgccggttttcgaacatacgtttggttgg
aaagagtcggaaaagcgtcttctcgacttagaggggtcattgctctccaaaagcctgctc
aatacattacaaaacgcccatgcgtatgactttccaagagaagcccatccctatacgcac
cagcttcaggcttggcgaacgttgcttaacgagaaacctcgatctgccatcattaccagt
ggcaccggctcgggaaaaacagaatgtttcatggtgcctatccttgaagatctaatccgg
gagcgtgagcgaaatcagtcatccttgattggggtgagagcgctatttctctatcctctc
aacgccctaatcaactctcaacaggagcgattagatgcatggacccgtgcgtacggtaaa
gatattcggttttgtttatacaacggtaaaactgaagaacgcgaaggggtcattcgtaag
attcaagaacagaaacccaaccaggttttgtcacgcgagcttttgcgcaaagagcccgcg
ccaatattaatgaccaacgcgacaatgctcgaatacatgctggttcgtcaggtagacaat
cctatcttggagatttcaaagcaacagcagtctctacgctggattgtcctcgacgaggca
cacacttacgttggttctcaagccgcagaaatgtctctcctgctgcgccgggtcgttcaa
gcattcggtaaagatcctgaggaaattcgttttgtcgcgacatcggccaccatcgccggg
ggtgaggccgaagaaaagttgaaacgctaccttgcagatctcgcaggagtgcggctagaa
caagtcgacgtcattggaggatctcgtgtttggccggatatcttgttcgactcgaaagtc
gaaaaggcctcgctggaggtcgtgcagtctatcgaggataaacaagaaatatcaccgacc
cgttttgattctttaggacgcaattcaatagcacgctcgttaaggcatgcgattgttaac
tcgaccaaaccgttagatttaaatgaattactgacgatactgaaatccgaattgatgcct
ggctcgcggctggagcagcaacgggaagtgttaggttggctcgatgtatcaactggcacc
cgacggcataaggacgaaccgccgtttcttaagctacggacccatctttttcaacgaatg
cttcatggactatggtcctgcatagaccccaattgcactgccaaatctgccagtctgagt
gaatggccatttggcaacgtctacgttcatcaacgtgcacgctgcgaatgcaacgcccca
gtgtacgaattaggattttgcgatgactgtaaaactccgcatttgattgcggaggatcgc
aacggggttcttcaccaattgagtccgtacgcaggagatgagttttctctgagctacgaa
agcggcgaagaagagacgtcgcctgaacgtgaggcaaccggccccactactagtcgtgct
tacgcacaacgtttggtaattgccgggttgcaggtcgcacaagatccctttttcagcgtc
agcctcgatctcgacacccatgggttatgtgctactaactcagcgcgccctatcaacatt
acaatcgctgaagagaaagcggcttgctgtagtcactgcgatcacgaacttccaaacaaa
aaaagctttctgagaaaagcgtacctgggcgctccattctatgttgcgaatgcagtcccg
acggtgctggagttttgcccagatgccgacaaaaaagacagcaatgagcgctccccagaa
gaattacccggtcggggtcgcaagctaattacgttcaccgatagccgtcaaggtacggca
cgtatggccgtgcgcatgcaacaagaagccgagcgttcgcggttgcgtggcttagtattt
gaaacgcttcggaacgttcaggccaaagctgatgcggaacctaaagacgttcctactggc
gactatgatctgctgatgcaccaggccgaaggcttagaacagtcgggaatgggtgtaatg
gcggcagagctacgcagaaaagcggccgcgctacgatccggcagcgccctacaaaaacga
atcgtcagcgtcgattgggcaagcatggtgtatgagctcgcggcctccaaagatgtagag
cagtcaatcctgcgttacaaccgctacgctaaccctgtcctttttgacgggagccaaggt
ggcgcaaccatggctcgcttacttttagctcgggaattttcccgacgcccaaaaaatcaa
aacagtacggagactctcggccttgtaaaagtaacttaccgaggtctcaaagaaattagc
tctacaccgccgatgtggacagaaacaaaagccgtaccggcgacaggagcattttcggtg
cctgaaactcgcttaacgcttgaggattggcaagactaccttaaagttgcacttgatttt
tacgtgcgcgagaacacctttataaacatggatcgcgacatgcaatcctggatgggcagc
aggtttacccccaaatcgctgttctctccaaaaatcgagatggaagaaagcacaacagta
aaaaaatggcctcaaattaaatctgggaatccgcatcggttagtaaaactactggaacaa
gccaccggattgaatcggacggtcgctacagatgcggacaaaatcaatgcttggttagag
gccgcatggtctgctctaacacaggctctcatcctggaacccgcagatccagggcatcgc
ctcaagctagaaacactgaccttttcgctattagaagaggggtggctctgcccgataacg
catcgaattttcgattcgacttttcgtgggctaaccccctatttacccataaagttgcgt
ccgcaagactaccgttgccagaaaatccaactcgcctcgctagctaacctccagatagat
ggcagcgccgtgaccaagcaattgcagatccggtcgcaggtcttacaagatccggtcatc
cagcaccttcggtccgagaatctctggaccgatattagcgaccgtaccgtagaaggcgga
ttttactatcgaaccgcagaacattcggctcagcagtcggcgcagcgactcgatgactat
gttgatttgtttaagaagggtgatatcaacgtactcaactgctccacgactatggagatg
ggcgtagatattgggggcatctctgctgtagtgatgaacaatctgccgccccaccctgcc
aactatttgcaacgggcgggacgcgccggacgccgtagtgaggcacgcgcaatagcctac
accttatgtaaagcggaccctcataaccagcgcgcgtttgcacagcctaagtggccattc
attaccgccattcccgcgcccaccattactttaagctcttctcgcattgttcggaggcac
gtcaattcgctgctcttgtctattttcctaaaatcaaaaactagtagtgacggtgatcga
accaggctgactctccaatggttttttggcggggacgactcaccctgccagcaattcaaa
agctggctgactagttgtcaggcagaattcgcagacccaatcaaacgccttgtcagcgga
acctgcttagatggctgcctgctcagcacaatctcagcagagactcaggaaagcgtacgt
attctggaggaccggtggcttgaagagtctcgaaagctcaacgctaagctgcaagcggcg
acagatttgccgtacaaaaaagcgctagagctggagaaaaaacgtcacgacggtgagtac
ttgcttcgcgatctcgcgtcccgtgcgttccttccaggatatggattccctaccgatgtc
gtgacactcaatacctacaatattgaggacttcaggcaccagcgaactcatcctgagagt
cgtgaagacagcattttcaacaacaaagagcttccgtctcgcggcttaaacattgcgatc
cgagagtatgcacctgggtcgcaagtggtaatcgatgggcgagtctatcgttcggcagga
atcagtttgcaatggcattcgtcaggccaagtaaacgaagcacaaaaatttgatatcgcc
tggcgatgctcaaattgtggagcgacaggcgtaatcgaaaacgcttataccaacagctcc
gagctaacgtgctcacactgcatgcacgcaattcaaccaagcgagcgccgaaccgtcctt
cgccctggcggctttgtaaccgacttttatgagtccacaacaaacgacatcacttctcag
aagttcatccgagttgaacgacctcgcatccaactgactggcgagacgatctcgctgccc
gacaagcggtgtggtttcgttcgatttggtcacgatggcagtgtgtttcatcattcatcc
ggtgaacacgaaaaaggttacgccgtgtgcctaacctgcggacgtgcagattcaatgctc
gcctccggagacattcctaaaaatctgcttccagatcagctacaccggccagtgggcggg
atcacaggcagtcgtaaagagttcgactgccccggaacggcagttaagcctaaccttttc
ctgggctatcaaattcgcactgacgtcatggagctttacttgagaagtccccagacaggc
ctgtggctcggggatagtctggcagagcaaatcatagccacgacccttgccgttgcacta
cgcgacgtaatcgccgaactcttaggtattgccagcacagaaatgggctttggtttccgt
cttgatcgtgatatcgaaagtggacaagagcgaacggttattcagctattcgatgaagtc
agcggaggagctgggtttgtcctggctggcttagcgaataccacggaactattacgtaaa
gcgttagggaagctgcattgcccggttaactgcgaaaacgtctgctcgcactgtcttgca
ggtcaagacagtcgagtggagcgagaggagctagatcgtgggcgcgccatggagtggctg
actgtgtcgggcctgattgaacatttagacttgccctgcgagtttgagactgtggtgggg
gctagttattgctcgaccggcccgatccgctatttgtcctctgcgatcaattcagcggat
cgcagtgaaaatgacacctctatttgcttggtgatgaggggcgatgcagaggactgggac
ctagatcacccttacttccgtgaaaaaatcctcacttgggcaatcgctgacaaactcaag
gtgaaactggcaattccttcaggagcgtcgctaagcaaagcacagaagaacaccctcttt
gacctggctagtcttggggtggtgattgaggatatggacaacactcttccaccgatcaaa
ccttacttggtggctcaaattcgttccaagtcgggcatcaaaagtctttttagcagcgat
gcctccgctgcgactccaggagtcggatggctgagtagcaacgatggaatagtatgggct
ggaagcaactgtgtttctgattgcggtggtcagcctatcgacgtccggacctggcgccaa
tttgagcagggtgcacgggtcatcgaaatcacccacgaacttgacggtcctatcagcagc
ttgcataggcgtctcgctactctcattgagaagcacgcgcccgaattgactgagttgatt
gccacggatcaagcaacagtggtcagctattccgaccgttatttgaaatcaccatggtcg
ttaatgttgttaagcggttttcttgaacttttcaaaaatgaaaagcttgagtcgcttcga
attcaaacgctagcatccagtggcgatcagtccagcaatcaaattagtcatgactggagg
ttccaacttgatcaagaagcacttcttaagctttggttgggtagccagttctccatctca
cctgaaattgaaatcaaagaacgaagccgggaacttcaacacgcgagagtgataacagta
gattgggtgtcgggtaagcgcagcaaagttttccttgatcaaggaatgggatactggcga
ggtaaattgccgtatcgcgaccagatggggtttgacttccgtgctaaccacgagagccaa
gcgctacaaatgctggagaaatataaaatggcgcaaatgagtcccaacggtgattggccc
acttacatgagcctgctcgtgagctaa
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