Pseudomonas bubulae: V6B39_20100
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Entry
V6B39_20100 CDS
T10711
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00280
Valine, leucine and isoleucine degradation
pbub00650
Butanoate metabolism
pbub00907
Pinene, camphor and geraniol degradation
pbub01100
Metabolic pathways
pbub01120
Microbial metabolism in diverse environments
pbub04146
Peroxisome
Module
pbub_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
V6B39_20100
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
V6B39_20100
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
V6B39_20100
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
V6B39_20100
Enzymes [BR:
pbub01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
V6B39_20100
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Motif
Pfam:
HMGL-like
HypF_C_2
Motif
Other DBs
NCBI-ProteinID:
WWR37243
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Position
4426608..4427504
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AA seq
298 aa
AA seq
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MTLPTHVRLIEVGPRDGLQNEAQPISVADKVQLVDALTDAGLGYIEAGSFVSPKWVPQMA
GSAEVFAQIRRKPGVVYGALAPNLRGFEDAVAAGVKEVAVFAAASEAFSQRNINCSISES
LARFVPIIEAARQHGISVRGYVSCVLGCPYEGQVSAQQVAQVAQELYAMGCYEVSLGDTI
GTGTPTATRTLFETVAACVPREKLAGHFHDTYGQALVNIYASLQEGIAVFDSSIAGLGGC
PYAKGASGNVATEDVLYMLNGMGIDTGVDMDKLLLAGAHICKVLGRVTGSRVAKARQG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgacacttccaacccatgtgcggctgatcgaagtaggcccgcgcgacggtctgcaaaac
gaggcccaacccatcagtgtcgcggacaaggtgcaactggttgacgccctgaccgacgcc
ggattgggctatatcgaagccggcagctttgtctcccccaagtgggtgccgcaaatggcc
ggttcggctgaagtcttcgcacaaatccgccgcaagccgggcgtggtctacggtgcgctg
gcaccgaacctgcgtggttttgaagatgccgtggccgccggggtaaaggaagtcgcggta
tttgccgccgcatccgaagcgttctcgcaacgcaatatcaattgctcgatcagcgaaagc
ctggcgcgctttgtgcccattattgaagcggccaggcagcacggcatcagcgtacgcggc
tatgtgtcctgtgtgctgggctgcccttatgaaggccaggtcagtgcgcagcaggtggca
caggtagcgcaggagctgtacgccatgggctgttacgaggtgtcactgggcgacaccatc
ggcaccggtacaccgacagccacacgcaccctgtttgagacggtagcggcttgcgtcccg
cgggaaaaactcgccgggcatttccacgatacctacggtcaggcgctggtaaatatctac
gccagcctgcaggaaggcatcgcggtattcgacagctccatcgccggcctcggcggttgc
ccctatgccaagggtgccagcggtaacgtggccacggaagacgtgctgtacatgctcaac
ggcatgggcatcgataccggggtcgacatggacaagctgttactggccggcgcgcacatc
tgcaaggtgctgggtcgtgttaccggatcacgggtggcaaaggcccgccagggctaa
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