Pseudomonas bubulae: V6B39_21695
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Entry
V6B39_21695 CDS
T10711
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
V6B39_21695 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbub03400
]
V6B39_21695 (ung)
Enzymes [BR:
pbub01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
V6B39_21695 (ung)
DNA repair and recombination proteins [BR:
pbub03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
V6B39_21695 (ung)
Prokaryotic type
V6B39_21695 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WWR37540
LinkDB
All DBs
Position
complement(4775876..4776568)
Genome browser
AA seq
230 aa
AA seq
DB search
MTPDDRIKLEPVWKQALREEFDKPYMAELREFLRQEHAAGKEIYPPGPLIFNALNLTPLD
KIKVVILGQDPYHGPGQAHGLCFSVQPGIPTPPSLVNIYKELKRDLNIDIAPHGCLQHWA
EQGVLLLNTTMTVERANAASHAKKGWEHFTDRIIQVVSEQQPKLVFLLWGAHAQSKQKLI
DATKHLVLTSVHPSPLSAYRGFIGNGHFSRTNKFLEQNGLAAIDWKLPPV
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggatgaccgtataaaacttgaacctgtctggaaacaggcattacgtgaggag
ttcgataaaccttacatggccgagctgcgcgagttcctgcgccaggaacatgcggccgga
aaagagatttacccaccgggtccgcttattttcaatgcccttaacctgacgccgctggac
aagatcaaggtggtcattcttggtcaggacccttatcacggccccggtcaggcccatggt
ttgtgtttttcagtacagcccggtatcccgacaccgccgtcgctggtcaatatctataaa
gagctcaagcgtgacctgaatattgatatcgcccctcacggctgcttgcaacattgggca
gagcagggcgttttgctgctcaataccacgatgacggtggagcgcgccaatgccgcctcc
catgccaagaagggctgggagcattttactgaccggattatccaggtggtcagcgagcag
caacccaagctggtgttcctgctgtggggcgcccatgcccagagcaagcaaaaactgatc
gatgcgaccaaacacctggtgctgacgtcggtgcatccatcgccgctatcggcgtatcgg
ggctttataggcaacggccacttcagccgaaccaacaagttccttgagcaaaacggcctg
gctgcgatcgactggaaactgccaccggtttaa
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integrated database retrieval system
