Pseudomonas bubulae: V6B39_21845
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Entry
V6B39_21845 CDS
T10711
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
pbub Pseudomonas bubulae
Pathway
pbub00541
Biosynthesis of various nucleotide sugars
pbub01100
Metabolic pathways
pbub01250
Biosynthesis of nucleotide sugars
Module
pbub_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V6B39_21845 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pbub01005
]
V6B39_21845 (kdsA)
Enzymes [BR:
pbub01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
V6B39_21845 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
pbub01005
]
Lipid A
V6B39_21845 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
WWR37566
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Position
complement(4802692..4803537)
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AA seq
281 aa
AA seq
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MAQKIIRVGNIEIANDKPMVLFGGMNVLESRDMAMQVCEEYVRVTEKLGIPYVFKASFDK
ANRSSVSSYRGPGLEEGMRIFQDIKAAFGVPLITDVHEPAQAAVVAEVCDIIQLPAFLSR
QTDLVVAMAKTGAVINIKKAQFLAPQEMKHILSKCEEAGNDQLILCERGSSFGYNNLVVD
MLGFGIMKQFEYPVFFDVTHALQMPGGRSDSAGGRRAQVTDLAKAGISQSLAGLFLEAHP
DPDNAKCDGPCALRLDKLEPFLAQLKSLDELVKSFPTIETA
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaaagattatccgtgtaggcaatatcgaaattgccaacgacaagccaatggtc
ttgttcggtggcatgaacgtgctggaaagccgtgatatggccatgcaggtgtgcgaagag
tacgtacgggtcaccgaaaagcttggtattccttacgtgttcaaggccagtttcgacaag
gccaatcgttcatctgtcagctcttaccgtggcccaggcctcgaagaaggcatgcggatt
tttcaggacatcaaggccgccttcggtgtgccgctgattaccgacgtccacgagcctgcg
caagcggccgtggtcgccgaggtctgcgacatcatccagttgccggctttcctgtcgcgt
caaactgacctggtcgtggccatggccaagaccggcgccgtgatcaacatcaaaaaagcc
cagttccttgcgcctcaggaaatgaaacacatcctgagcaaatgcgaagaagcgggcaat
gatcagttgatcctctgcgaacgtggctccagctttggctacaacaaccttgttgtcgac
atgctgggcttcggcatcatgaagcagttcgaatacccggtgtttttcgacgtgacccat
gcgctgcaaatgcctggcggtcgctcggactctgccggtggtcgtcgtgcccaggtaacc
gacctggccaaggctggtatcagccagagcctggccggtctgttcctggaagcacacccg
gatcctgacaacgccaagtgcgacggcccttgtgccttgcgcctggacaagctggagcca
ttcctggctcagctgaagtcgctggatgagttggttaaaagttttccgacaatagaaacc
gcgtaa
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