Pseudomonas bubulae: V6B39_22250
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Entry
V6B39_22250 CDS
T10711
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
pbub Pseudomonas bubulae
Brite
KEGG Orthology (KO) [BR:
pbub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pbub03036
]
V6B39_22250 (xerD)
Chromosome and associated proteins [BR:
pbub03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
V6B39_22250 (xerD)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF3435
Motif
Other DBs
NCBI-ProteinID:
WWR37644
LinkDB
All DBs
Position
complement(4898098..4898994)
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AA seq
298 aa
AA seq
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MPAIDDPLIDRFLDALWLEKGLSDNTRGAYRSDLALFNGWLQERGIAMASAGRELILDHL
AWRLEQGYKPRSTARLLSGLRGFYRYLLRENLIAVDPTLQVDMPQLGRPLPKSLSEADVE
ALLAAPDLSEAIGQRDRAMLEVLYACGLRVTELISLTLEQVNLRQGVLRVMGKGSKERLV
PMGEEAIVRVERYMRDARHELLGGRPSDVLFPSQRGEQMTRQTFWHRIKHQARVAGINKS
LSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVARARLQDLHALHHPRG
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctatagacgacccacttatcgaccgttttctggatgccctgtggctggaaaaa
ggcctgtcggacaacacccgcggtgcttatcgcagtgacctggccttattcaatggctgg
ttgcaggagcgcggtatcgctatggccagcgccgggcgcgagttgatcctcgatcacctc
gcctggcgcctggagcagggctacaagcctcgctcgactgcgcgcttgctctcaggtttg
cgtggcttttatcgttatctgctgcgagaaaacctgattgccgtcgaccctaccttgcag
gtcgatatgccgcagttgggcaggccattacccaagtccctgtcagaggcagacgtagaa
gcgctgctcgccgcccctgatctgagtgaggccatcggccagcgtgatcgggccatgctt
gaagtactgtatgcctgtggcctgcgcgtaaccgaattgatcagcctgaccctggagcag
gtcaacctgcgccagggcgttttgcgcgtgatgggcaagggcagcaaggaacgcctggtg
ccgatgggggaggaggccatcgtccgggtcgagcgctacatgcgcgatgcccggcatgag
ctgctgggcggtcgccccagtgatgtgctgtttcccagtcagcgcggtgaacagatgacc
cgccagaccttctggcatcgcatcaagcatcaggccagggtggccgggatcaacaagtcg
ctgtcgccacataccttgcgccatgccttcgccacccatttgctcaatcacggcgccgat
ttgcgtgtggtgcaaatgctgctggggcacagcgacctctcgacgacacagatttacacc
catgttgcccgtgcccgactgcaggacctgcatgccctccatcacccgcgtggctag
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