Hoylesella buccalis: LK429_02375
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Entry
LK429_02375 CDS
T08692
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pbuc
Hoylesella buccalis
Pathway
pbuc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LK429_02375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbuc03021
]
LK429_02375
03400 DNA repair and recombination proteins [BR:
pbuc03400
]
LK429_02375
Enzymes [BR:
pbuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LK429_02375
Transcription machinery [BR:
pbuc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LK429_02375
DNA repair and recombination proteins [BR:
pbuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LK429_02375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UEA63449
LinkDB
All DBs
Position
complement(586877..587869)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILAFQKPDKVVMLEADDKFGKFEFRPLEPGFGITIGNSLRRILLSSLEGYAINTIRIA
GVEHEFSSVPGVKEDVTNIILNLKQVRFKQVVEEFENEKVSITVENSTEFKAGDIGKYLT
GFEVLNPDLVICHLDAKASMQIDLTINQGRGYVPADENRQFCTDVNVLPIDSIYTPIRNV
KYSVEPYRVEQKTDYDKLVIEVTTDGSLSPKDALKEAAKILIYHFMLFSDEKITLENPDQ
DDNQEFDEEVLRMRQLLKTKLIDLNLSVRALNCLKAAEVETLGDLVQYNKTDLLKFRNFG
KKSLSELDDLLESLNLSFGTDTSKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcgatattagcatttcaaaaacctgataaagtagtaatgttggaggctgacgacaag
ttcggtaaattcgaattccgtccacttgagcctggctttggtattaccatcggtaattca
ttgcgccgcattctcctttcatcacttgaaggctatgctatcaataccatccgtatagct
ggtgttgagcatgagttttcttcagtacctggtgtaaaggaagatgttaccaacattatc
ttgaatctcaagcaagttcgattcaagcaagtagtagaagaattcgagaatgagaaagtt
agtatcaccgtagagaattccactgagttcaaagcgggcgatatcggtaagtatctgact
ggatttgaagtgttaaatcctgatttggtgatttgtcatttagatgctaaagcttccatg
cagatagacttgaccatcaatcaaggacgtggatacgttcccgctgatgagaaccgtcaa
ttctgcacggatgtcaatgtcctcccaatcgattcaatctacaccccaatccgtaatgtt
aaatactcagtagagccttatcgtgttgaacaaaaaaccgactatgataagcttgttatt
gaggtaaccacggatggttccctatccccaaaggatgcactgaaagaagctgccaagatt
cttatctatcacttcatgttgttctcggatgaaaagataacactcgaaaatccagatcaa
gacgacaaccaggagtttgatgaggaagtgttgcgcatgcgtcaattgctaaagacgaaa
cttattgacttgaaccttagtgttcgcgcactcaattgcctcaaggcagctgaagttgaa
actctcggtgacttggtgcagtacaacaagacagacttattgaagttccgcaactttgga
aagaaatcgctttcagagcttgatgatttgctcgaaagtctgaatctatcatttggaacc
gatacatcaaagtataaactggataaggagtaa
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