Hoylesella buccalis: LK429_03555
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Entry
LK429_03555 CDS
T08692
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pbuc
Hoylesella buccalis
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbuc03032
]
LK429_03555 (topA)
03400 DNA repair and recombination proteins [BR:
pbuc03400
]
LK429_03555 (topA)
Enzymes [BR:
pbuc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LK429_03555 (topA)
DNA replication proteins [BR:
pbuc03032
]
Prokaryotic type
DNA Topoisomerases
LK429_03555 (topA)
DNA repair and recombination proteins [BR:
pbuc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LK429_03555 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
UEA63659
LinkDB
All DBs
Position
878098..880428
Genome browser
AA seq
776 aa
AA seq
DB search
MQKNLVIVESPAKAKTIEKFLGEDYKVMSSYGHIRDLKKKELSIDPDTLEPNYEIPEEKK
KLVNELKKQAKEAKKVWLASDEDREGEAISWHLCEVLGLDEEKTNRIVFHEITKPAILEA
IKNPRHLNMDLVNAQQARRVLDRLVGFRLSPVLWRKVKPALSAGRVQSVAVRLIVERERE
IQAFESEPYYRINAIFVITNEDGSASEVKAELDKRFSKHEEALAFLEQCKDAKFTVDSIT
RKPLKRTPAPPFTTSTLQQEAARKLGFTVGQTMMVAQHLYENGQITYMRTDSVNLSQLAV
NTCKDEIVKAYGAEYSKPRKYHTHSKGAQEAHEAIRPTYMSKHEIEGTSQERRLYDLIWK
RTLASQMADAQLEKTTVTIDVSGVKEQFTANVEIITFEGFIKAYHESNDEDENNQDDYTH
SLPALKEGDLLERREITSTERYSQSPIRYTEASLVKKLEELGIGRPSTYAPTISTIQQRE
YVQKGDKKGTDRAYTIDSLKGGKITSKTKKEVVGNEKGKLLPTDIGMVVNDFLMENFPSI
MDYNFTANVEEKFDSIAEGNTEWNKMMKSFDKSFKPTVEKVMNARSEHKAGERELGIDPK
SGKPVFVKIGRYGPVVQIGTADDDEKPRFSQLPADKSMEEMTLEDALELFKLPRTVGLFE
GTDVVIGAGRFGPYVLHQKKYVSLPKEENPLKVTLETAIQLIEQKRKQEKERHIKSFEQD
TKLEVLNGRYGPYIAYDGKNYRLPKAQHGKAADLTYEECMDIVHAAPAKKTAKSRK
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaatttagttatcgtagagagccccgcaaaggcgaagactatcgagaaattt
ctaggcgaagactataaggtcatgtcatcatacggacacatcagagacctgaagaaaaaa
gagttgagcattgatccagatacacttgaacccaattacgagattccggaagagaagaaa
aagcttgtcaacgaattgaagaagcaggccaaagaggctaagaaggtgtggctggcttcc
gatgaggaccgcgagggagaggctatatcatggcatctgtgcgaggtgcttggtttggac
gaagagaagaccaaccgcattgtctttcatgagattaccaagccagccattctcgaagcc
atcaagaatccacgtcatttgaacatggatttggtcaacgcacaacaggcacgccgtgtg
ctcgaccgcctggtgggtttccgcttgtcgcccgtgttgtggcgaaaggtgaagccagcc
ctgtcggccggacgtgtgcaaagcgtggccgtgcgcctcatcgtggagcgcgaacgcgag
atacaagccttcgaaagcgaaccttactatcgcatcaacgccatcttcgtcatcaccaac
gaagacggatcggcatcggaagtgaaggccgaactggacaaacggttcagcaaacacgaa
gaggccctggcctttctggagcaatgtaaggatgccaagttcaccgtggacagcatcacg
cgcaagcccctgaaacgcacgccagcaccacctttcaccacttcaaccctgcaacaggaa
gcagcccgcaagttgggatttacggttggacagaccatgatggtggctcagcatctgtat
gagaacggacaaatcacctacatgcgtaccgacagcgtgaacctctcacaactggcagtg
aacacctgtaaggatgaaatcgtgaaggcatacggtgcagaatacagcaaaccacgcaag
taccacacgcactcgaaaggcgcacaagaggctcacgaggccattcgcccaacgtacatg
agcaagcacgagatagaaggtacatcgcaagagcgccgtctgtacgacctgatttggaaa
cgcacgctagccagtcagatggctgacgcacagttggagaagactaccgtgaccattgat
gtaagcggtgtgaaagaacagtttacggccaatgtcgaaatcatcacgttcgaaggtttc
atcaaggcttatcacgagtcgaacgatgaggatgagaacaaccaggatgactatacccac
tcgctgccagccttgaaggaaggcgacctgttggaacgtcgtgaaatcacctcaaccgaa
cgctattcacaaagtccgatacgctacacggaagccagtttggtgaaaaaactggaagaa
ttgggcatcggccgaccctctacctacgcacccactatcagcaccatacagcaaagagaa
tatgtgcagaagggcgataagaagggtactgatagggcatacaccatcgattcgctgaag
ggtggcaagataacgtcgaagaccaagaaagaagtggtgggcaacgagaaaggaaaacta
ttgcctacggacatcggaatggtggtgaacgacttcctgatggagaacttccccagtatc
atggactacaacttcaccgcgaatgtggaagagaaattcgacagcattgctgagggaaac
accgagtggaacaagatgatgaagagctttgacaagagcttcaagcccactgtagaaaag
gtgatgaacgcacgaagcgaacacaaggctggcgaacgtgaactgggtatcgatcccaag
agtggcaaaccggtgttcgtaaagataggcagatacggaccagtggtacaaatcggtacg
gccgatgatgacgagaaaccccgattctcacaactccctgcggacaaaagcatggaggag
atgaccttggaagacgcgctcgaattgttcaaactgccgcgtaccgtgggcctgtttgaa
ggtactgacgtggtgattggggccggacgattcggaccctacgttcttcatcagaagaaa
tatgtgtcactgcccaaagaagaaaacccgctaaaggtgactttggaaacggccatccaa
ctaatagaacagaagcggaagcaggagaaagagaggcacatcaagtcgtttgaacaagac
acaaaattggaagtgctgaatggtcgttacggtccttacatcgcttatgacggcaaaaat
tatcgcttgcccaaagcccaacatggcaaggcagccgacttgacatacgaggagtgcatg
gacatcgtgcatgcggcaccggcaaagaagacggctaaaagcaggaaataa
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