Hoylesella buccalis: LK429_04120
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Entry
LK429_04120 CDS
T08692
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pbuc
Hoylesella buccalis
Pathway
pbuc03030
DNA replication
pbuc03410
Base excision repair
pbuc03420
Nucleotide excision repair
pbuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LK429_04120 (polA)
03410 Base excision repair
LK429_04120 (polA)
03420 Nucleotide excision repair
LK429_04120 (polA)
03440 Homologous recombination
LK429_04120 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbuc03032
]
LK429_04120 (polA)
03400 DNA repair and recombination proteins [BR:
pbuc03400
]
LK429_04120 (polA)
Enzymes [BR:
pbuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LK429_04120 (polA)
DNA replication proteins [BR:
pbuc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LK429_04120 (polA)
DNA repair and recombination proteins [BR:
pbuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LK429_04120 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LK429_04120 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
ApoC-I
Motif
Other DBs
NCBI-ProteinID:
UEA63759
LinkDB
All DBs
Position
1008580..1011342
Genome browser
AA seq
920 aa
AA seq
DB search
MDKLFLLDAYALIYRSYYAFINNPRINSKGLNTSAIMGFCNTLNEVLTKENPTYIGVAFD
HGLTFRNEAFPAYKAQREATPEDIKKAVPIIKQILEAYHIPSLQVDGFEADDVIGTLAMK
SGKKGIDTYMLTPDKDYGQLVRKNVFMYRPRHGGGYETLGVKEICDKYNITTPLQVIDLL
ALMGDSADNFPGCPGVGEKTASKLINQFGSVEELLKRTAEIKGKLREKVENAIEDIKMSQ
FLATIRTDVPIELNLDELKLKQPDENKLAEIFTELEFKTFANRILNKSQNNPKTANKQLN
LFAESSAIGQIEPKNASFESLKTGHYEYKLIDSQEEAHRICDFFLTNKILSLDTETTSTN
PMEAELVGLSFAVEPKKAFYVPVPANREDAVNLVKIFKPLYENEEIVKVGQNIKYDMEVL
RNYGIELKGPMFDTMIAHYVLQPELRHNMDYMAEVYLNYQTIHIEELIGERGKNQKNMRD
LAPTDVYLYACEDADITLQLKNALEPKLKEAGVANLFYQMEMPLVNVLAEMEMNGVRIDT
EALKETSENFTKRMLDLEHQIHELAGESFNVSSPKQVGDILFGKLQIAEKPKKTKTGQFV
TSEEELQKYAAGNEIVTLILDYRGLKKLLGTYVDALPKLINPRTGHIHTSFNQTVTATGR
LSSSDPNLQNIPVRGEDGKEIRKCFIPEDGCLFFSADYSQIELRVMAHLSGDKHMIEAFE
HGYDIHAATAAKIYGKDMKDVTRDERTKAKRANFGIIYGITVFGLAERLGIDRNEAKQLI
DGYFTTFPQVYDYMEQAKTTAREQGYVETFFHRRRYLPDINSRNATVRGFAERNAINAPI
QGSAADIIKVAMIRIYERFKRENIQSKMILQVHDELNFSVLPEEKEQVERIVMEEMQNAY
PLRVPLIADGGWGKNWLEAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggacaaactgtttctcttggacgcctatgcactcatttataggtcgtattacgcattc
atcaacaacccgcgtatcaactccaaaggcctcaatacatcggctatcatgggcttttgc
aacaccctcaacgaggtgttgacaaaagagaatcccacatatattggcgtggcattcgac
catggacttacctttaggaacgaggctttccccgcttacaaggctcaacgggaagccaca
cccgaagacattaagaaagcggtacctatcatcaaacaaatattggaggcctaccacatt
ccaagtttgcaagtagacggcttcgaagccgacgatgttatcggcacattagcgatgaaa
tcgggcaaaaaaggcattgatacttatatgcttacccctgacaaagactatggacaattg
gtgagaaagaacgtcttcatgtaccgtccacggcacggagggggttacgaaacgctgggt
gtaaaagagatatgcgacaaatacaacatcactaccccactacaagtcatcgaccttttg
gcactgatgggtgactcggcagacaactttccggggtgtccaggcgtgggagaaaagacc
gcttcaaaacttatcaatcagtttggctctgtggaggagctgttgaaacgaaccgcagag
attaaaggtaagttgcgcgagaaagtggagaatgccatcgaggatattaagatgtcccaa
ttcttggcaaccattcgcaccgatgtccccatcgagttaaatctggatgaattgaagttg
aaacaacctgatgaaaataaattggccgaaatcttcaccgaattggaattcaaaacgttc
gccaacagaatccttaataaatcacaaaataacccaaaaacagcaaacaaacagctcaat
ctctttgcagaatcctcggcaattgggcagattgagccaaaaaacgcgagttttgagagc
cttaaaacgggtcattacgaatacaaactcattgatagtcaagaagaagcgcatcggatt
tgtgactttttcttaacaaataaaattctcagtctagacacagagaccacttcaaccaac
cccatggaggcagaattggttggtttgagctttgctgttgagccgaaaaaggcattttat
gtgcctgttccggctaaccgtgaagatgccgtaaatcttgttaaaatattcaaacctctc
tatgaaaacgaggagattgtgaaagtaggacaaaatatcaagtacgacatggaggtgctt
cgcaattacggtatcgaactaaaaggaccgatgttcgacaccatgatcgcccattatgtg
ctgcaacctgaacttcgtcacaacatggattacatggcggaggtgtacctcaactatcaa
accattcatattgaagaactgattggcgagcgaggaaagaaccaaaagaacatgcgcgac
ctcgctcctaccgatgtttacctgtacgcttgcgaagatgcagacatcacattacaactt
aaaaacgcgctcgaacctaaactcaaggaagccggagtcgctaatctgttctaccaaatg
gaaatgcctttggtgaacgtactggccgaaatggaaatgaacggcgtgcgcatagacacc
gaagcgttgaaggaaacgtcagaaaacttcaccaaacgaatgctggatttggagcatcag
attcacgaactggctggcgagtcatttaatgtgtcatctcctaaacaggtgggcgacatt
cttttcggcaaattacaaatagccgaaaagcccaaaaagacaaagaccgggcagtttgtt
accagtgaagaggaactacaaaaatatgcggctggcaacgaaatagtaaccctcatctta
gattaccgtggactgaagaaactcttgggaacgtatgtcgatgccctacccaagctcatc
aatccccgaacaggacacatccacacctcgttcaaccaaaccgtaacggccacaggtcgg
ctctcctcgagcgatcccaacctgcaaaacatccccgtacggggcgaggatgggaaggaa
atacgcaagtgtttcatccccgaagacggttgtttgttcttctctgctgattatagtcag
atagaattgcgtgtcatggcgcatctcagtggtgacaaacacatgatcgaggcttttgaa
catggctatgacatccatgctgctaccgctgccaaaatatacggaaaggacatgaaagac
gtgacgcgtgatgaacgaaccaaagccaaacgcgccaacttcggcatcatctatggcatc
acggtgtttggcttggcagaacgattgggcatcgatcggaacgaagccaaacagcttatc
gacggctatttcaccacctttccgcaggtatacgactacatggaacaggctaaaacaacg
gctcgcgagcaaggatatgtggaaacattcttccatcgccgccgctatctccccgatatc
aacagccgcaacgctaccgttcgtggttttgcagagcgcaatgctatcaatgcccccatc
caagggtcggctgccgacatcatcaaggtggcgatgatacgcatttacgaacggttcaaa
cgagagaacatccaatcaaaaatgattcttcaggtacacgacgaacttaatttcagcgtg
ctgcccgaggagaaagagcaggttgaacgcatcgtgatggaagagatgcaaaacgcttat
ccgctgcgggttccactgatagccgatggcggttggggtaaaaactggctggaagcgcac
taa
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