Hoylesella buccalis: LK429_05275
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Entry
LK429_05275 CDS
T08692
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pbuc
Hoylesella buccalis
Pathway
pbuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK429_05275 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbuc03019
]
LK429_05275 (pnp)
03016 Transfer RNA biogenesis [BR:
pbuc03016
]
LK429_05275 (pnp)
Enzymes [BR:
pbuc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LK429_05275 (pnp)
Messenger RNA biogenesis [BR:
pbuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LK429_05275 (pnp)
Transfer RNA biogenesis [BR:
pbuc03016
]
Prokaryotic type
tRNA degradation factors
LK429_05275 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
UEA63963
LinkDB
All DBs
Position
1306039..1308375
Genome browser
AA seq
778 aa
AA seq
DB search
MNVITKTVQLPDGRTISIETGKVAKQADGSAVVRLGNTVLLATVCAAKDAVPGTDFMPLQ
VDYREQYSAAGRFPGGFTKREGKPSDNEILTSRLVDRALRPLFPSNYHAEVYVQIMLLSA
DGVDQPDALAGLAASAAMACSDIPFDFYISEVRVARINGEYVINPTFEQMKQADMDLMVG
ATKDNIMMVEGEMKEVSELDLINALKAAHEAIKPMCTVQDELNKELGKDVKREYDHEVND
EDLREKMNNELYQPVYDITKQALPKQERHDAFDKVLTDFLEEYDAAHAADLTEEELEEKH
AEATRYYDDVLKNAMRRCVLDEGKRLDGRKTDEIRPIWCEVSPLPMPHGSAIFTRGETQS
LSTCTLGTKLDEKMVDDVLDKSYQRFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRG
LKGQLPDDFPYTVRLVSQILESNGSSSMATVCAGTLALMDAGVPMKKPVSGIAMGLIKNP
GEDKYAVLSDILGDEDHLGDMDFKTTGTRDGLTATQMDIKCDGLSFEILEKALLQAKAGR
EHILNKMLETIAEPRSEMKPQVPRIEAFEIPKEFIGAVIGPGGKIIQQMQEDTGATITID
EVDNVGKIQVSAPNKESIDAAIAKIKSIVAIPEVGEIYEGTVRSIMPYGCFVEILPGKDG
LLHISEIDWKRLETVEDAGIHEGDKIRVKLLEIDPKTGKYKLSRRVLLEKPEGYVERERR
PRRENGGERRSRRDDNREGRRHYENGDRQPRRFEHRNEGSDRAYNNEPNELNDTFDAE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacgaaaacagttcaattgcctgatggcagaaccatcagcattgaaacc
gggaaagttgcaaaacaggccgatggctcagcggtagttcgcttgggtaacacggtgctt
ctcgcaactgtttgtgcagcaaaggatgcagttcccggaacagattttatgcctttgcaa
gttgattatcgcgagcagtacagtgccgcaggccgttttccaggtggattcaccaagcgc
gaaggcaagccaagtgataatgaaatcttaacttctcgattggtggatcgcgcacttcgt
ccgcttttcccgtccaattatcacgccgaagtgtatgtgcaaatcatgcttctttctgcc
gatggcgtagatcagcccgatgctttggctgggttggcagcatcagcagccatggcatgt
tcagatattcctttcgatttctatatcagtgaggttcgtgtggcacgcatcaatggcgaa
tatgtcatcaacccaaccttcgaacagatgaaacaagccgacatggacttgatggtaggt
gccaccaaggacaacatcatgatggtggaaggcgaaatgaaagaagtgtctgagcttgac
ctgatcaacgctttgaaggctgcacacgaggccatcaagcctatgtgtaccgttcaagat
gagctgaacaaggagctgggtaaggatgtgaaacgcgagtatgatcacgaggtgaacgat
gaagacttgcgtgaaaagatgaacaacgagctgtatcagcccgtgtatgacatcaccaaa
caggctcttcctaagcaagaacgtcacgacgctttcgacaaagtactcaccgatttcttg
gaggaatacgacgctgctcacgctgctgatttgaccgaagaggaactggaggagaagcat
gcagaggctacacgctactatgatgacgtgttgaagaatgccatgcgccgttgtgttttg
gacgaaggaaagcgtttggacggtcgtaagaccgatgagattcgtcctatctggtgcgag
gttagtccgctgcccatgcctcacggaagtgcaatctttacgcgtggtgagacgcagtcg
ttgtcaacttgtacgttaggaaccaaacttgacgagaaaatggtagacgatgtcttggat
aagagctatcaacgtttcttgttgcattacaactttcccccattctctacaggtgaagcc
aaggctcaacgtggcgttggtcgccgcgaaatcggtcatggacacttggcatggcgtggc
ttgaaggggcaattacctgatgacttcccctacacagtacgcttggtgagccagatattg
gaaagcaatggctcgtcttccatggccactgtttgtgccggtacgctggctttgatggat
gcaggtgtacccatgaagaagcctgtcagcggcattgccatgggcttaatcaagaatcca
ggtgaagataaatatgccgttttgagcgatatccttggtgatgaggatcatttgggcgac
atggatttcaagacaacaggtacgcgcgatggactgactgctacgcagatggatatcaag
tgcgatggcttgagctttgaaatcttggagaaagcgttgttgcaagcaaaggcagggcgc
gagcatatcttgaacaaaatgctcgaaacgattgctgaacctcgctcagagatgaagcct
caggtgccacgcatcgaagcatttgaaataccaaaagagtttattggagccgttatcggc
cctggtggaaagattatccagcagatgcaggaagacacgggggctaccattacgattgat
gaggtggacaatgtgggtaaaatacaagtgagtgcgcccaacaaagagtcaattgatgcg
gccattgccaagatcaaatccatcgttgctatccctgaagtaggcgagatatacgaagga
acagtacgctctatcatgccatacggctgctttgtagagatacttccgggcaaagacggc
ttgttgcatatctctgaaatagattggaaacgccttgaaacggttgaggatgccggcatt
catgagggtgacaagatcagggtgaagttgttggaaatcgatccaaagacgggcaagtac
aagctctctcgtcgtgttttgttagaaaaacccgaaggctatgtagagcgcgaacgtcgt
cctcgccgcgagaatggtggtgagcgtcgctcacgtcgcgatgacaatcgtgagggacgt
cgtcattatgagaatggtgaccgtcaacctcgtcgctttgaacatcgtaacgaaggctct
gatcgtgcttataacaatgagcccaacgagttgaacgacacgtttgatgcagaataa
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