Hoylesella buccalis: LK429_09560
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Entry
LK429_09560 CDS
T08692
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbuc
Hoylesella buccalis
Pathway
pbuc03410
Base excision repair
pbuc03430
Mismatch repair
pbuc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LK429_09560 (recJ)
03430 Mismatch repair
LK429_09560 (recJ)
03440 Homologous recombination
LK429_09560 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbuc03400
]
LK429_09560 (recJ)
DNA repair and recombination proteins [BR:
pbuc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LK429_09560 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LK429_09560 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LK429_09560 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
UEA62304
LinkDB
All DBs
Position
complement(2356902..2358638)
Genome browser
AA seq
578 aa
AA seq
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MHFKWNYVPPTSEETKAANELGEKLNISPLLAQLLIRRGITTESAAKRFFRPQLADLINP
FLMKDMDLAVDRLNDAMGRKERIMVYGDYDVDGCTAVALVYKFLQQFYSNIDYYIPDRYD
EGYGVSKKGIDHAQETGVKLIIILDCGIKAIDEIAYAKSLGIDFIICDHHVPDEVMPPAV
AILNPKRPDDSYPFKHLSGCGVGFKFMQAFAKNNSIPFSRLIPLLDFCAVSISADIVPVT
DENRILAFHGLKQLNQNPSVGLKAIIDICNLNGRDISMSDIVFKIGPRINASGRMENGKE
SVDLLVEKDFASALRQAKHINEYNEQRKDIDKQMTEEANQIVAKLESQKHHSSIVLYDEN
WKKGVIGIVASRLTEIYFRPTVVLTRDGEFATGSARSVTGFDVYSAIKSCRNLLVNFGGH
TYAAGLTLRWDDIKKFRERFQKYVDLHIEPEQTEPILDIDAIIDFKDITKRLHADLKKFS
PFGPGNSKPLFGTLGVFDYGTSKVVGREQEHIKLELVDSKSSNIVNGIAFGQSASARYIK
SKRGFDIAYTLEDNVFKRNAMQLQIEDIRPTEEEEQDF
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaaatggaattatgtaccacctacatcagaagaaacaaaggcagccaatgag
ttaggagagaaactgaacatcagcccccttctcgctcaattgctcatccgtcgtggcatc
actacggagtctgccgccaagcgattctttcgcccacaactggcagacctcatcaatcca
tttcttatgaaagacatggatttagccgtagacagattgaacgacgccatgggacgcaaa
gagcgcattatggtgtatggtgattacgatgtggatggctgtacggccgtcgcattggtg
tataagttcctgcagcaattctattccaacatcgattattatatccccgatcgctacgat
gagggctacggtgtgagcaaaaagggaatagaccatgcgcaggaaacgggtgttaaactg
attattattctggattgcggcatcaaggcaattgacgaaatagcatacgccaaaagcctt
ggaattgatttcatcatctgtgatcatcacgtccctgacgaagtgatgccacccgccgtg
gccatcttaaacccaaagcgcccggacgacagctatcctttcaagcatctgtcgggatgt
ggagtgggctttaagttcatgcaagcctttgctaagaacaatagtattcctttttcacgg
cttatcccactgctcgatttctgcgcagtgagcatctcggccgacattgtacccgtgaca
gacgaaaacagaatattggcgtttcatggtctgaaacaactgaaccagaacccaagtgtg
ggtttgaaggccatcatagacatttgcaacctcaatggaagggacatctccatgagcgac
atcgtgttcaaaattgggccacgcatcaatgcttcgggacgcatggagaatggcaaggag
agcgtggacctcttggttgagaaggactttgccagtgcgctgagacaggcaaaacacatc
aatgaatacaacgaacagcgcaaagacatcgacaaacagatgaccgaagaggccaaccag
atagttgccaagctggaaagccaaaagcatcattcgtccatcgtgctgtatgatgagaac
tggaagaaaggcgttattggcatcgtagcctcgcggttgactgagatttactttcgccca
acggtcgtattgacacgcgacggcgagtttgccacaggttctgcgcgcagcgtgacgggc
tttgacgtttattcggccatcaagagttgccgaaatttgctcgtcaatttcggcggacac
acctacgccgccggcttgaccttgcgatgggatgacatcaagaaattcagagaacggttt
cagaaatacgtggatctacacatcgaacccgaacaaactgagcctatcttagacatcgat
gccatcatcgatttcaaggacatcaccaaacggttgcatgctgacttgaaaaaattctca
ccctttgggccgggtaattctaaacctcttttcggcacactcggcgtgttcgactatggt
accagtaaggtagtaggacgcgaacaagagcacatcaagcttgagctggttgattcaaag
tcgagtaacatcgtcaacggcattgccttcggacagagtgcatcggctcgatacatcaag
tcgaagcgcggttttgacatcgcctacacacttgaggacaacgtattcaagcgcaatgcc
atgcaattgcaaatagaagatatacgtcctaccgaagaagaggagcaggatttctaa
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