Hoylesella buccalis: LK429_13370
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Entry
LK429_13370 CDS
T08692
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbuc
Hoylesella buccalis
Pathway
pbuc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbuc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LK429_13370 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbuc03021
]
LK429_13370 (rho)
03019 Messenger RNA biogenesis [BR:
pbuc03019
]
LK429_13370 (rho)
Transcription machinery [BR:
pbuc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LK429_13370 (rho)
Messenger RNA biogenesis [BR:
pbuc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LK429_13370 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
AAA
AAA_25
NCKAP5
S1CSD-TOTE-2
OB_RNB
Pept_S41_N_bact
Mor
Motif
Other DBs
NCBI-ProteinID:
UEA62981
LinkDB
All DBs
Position
3285805..3287802
Genome browser
AA seq
665 aa
AA seq
DB search
MYSKDELSSKDIQELSDIAQKLGAEIDENNTPEEIIYSILDKQAMSETDENATGTKRRRI
RIPVRETDRVYSVNGKEGENFDLKKKKPASEPTSLFKEDDMTKEDISSKEEKELTPEEEL
AAIPKHRGRKTKRELELLAMIDAKKEENQEDTEKQEKEAEDNDDTEALRSNEAHDEVNEK
DSENAEEEASEANSEDTIHKDSGMTNLLERLQAKVNAHNENEQERREAIAEGIWEGDPAD
GTDFIVVQDLPIVDQGAVPSYDMFDNPTTPVMPSASYQTPVNTNATNQPAYDFSDIIEAN
GVLEIMPDGYGFLRSSDYNYLSSPDDVYVASSQIKKYGLKTGDVVQCHVRPPHDGEKYFP
LTNIDKINGRNPNEIRDRIQFEHLTPLFPEEKFTLCGDKATTNLSTRVVDLFSPIGKGQR
ALIVAQPKTGKTILMKDIANAIAANHPEAYLMMLLIDERPEEVTDMARTVNAEVIASTFD
EPAERHVKIAGIVLEKAKRMVECGHDVVIFLDSITRLARAYNTVSPASGKVLTGGVDANA
LQKPKRFFGAARNIEGGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRSLSNKR
IFPAVNLVASSTRRDDLLQDKTTLDRMWILRKYIADMNPIEAMNSIHDRMIRTHSNDEFL
MSMNS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtatagcaaagacgaattatcatctaaagatatccaggaattgtcggatatcgctcaa
aaattgggtgccgaaattgacgaaaacaatacgccagaagaaatcatatattcaatactc
gataaacaagcaatgtcagaaacagatgaaaacgccacaggtaccaagcggcgtcgtatt
cgcataccggtacgtgaaactgacagagtgtactcggtgaatgggaaagagggtgagaac
ttcgacctgaaaaagaaaaaaccagccagcgagcctacttccttattcaaagaggacgac
atgaccaaagaagatatttcgtctaaagaagagaaggaattgactcctgaagaagaactt
gcagccatccctaagcataggggaaggaagacaaaacgcgagcttgaacttcttgcaatg
attgatgccaagaaggaagagaaccaagaagatacagaaaaacaagaaaaagaggcagaa
gataacgacgataccgaagcattacgctcaaatgaagcacatgatgaggtgaatgaaaaa
gattctgagaacgcggaagaagaggcttcagaggcaaactcagaagacacaattcataaa
gactctggtatgaccaacttattggaacgcttacaagcgaaagtgaatgcgcacaacgag
aacgagcaagaacgtcgcgaggccatcgcagaaggcatttgggaaggagatcctgctgat
ggtacagactttatcgttgtgcaagacttacccatcgtagatcaaggtgcggtgccaagt
tatgatatgtttgacaatcctaccacacccgtgatgccgtcggcttcataccaaacgcct
gtaaacacgaacgctaccaaccagcctgcatacgacttttctgacattattgaagcaaat
ggtgtgctggaaatcatgccagatggctatggattcctacgttcaagcgactacaattat
ctgtcttcgcctgatgatgtgtacgttgccagctcacaaatcaagaagtatggcctgaaa
acaggtgatgtggtacagtgtcatgttcgccctccacatgacggagagaagtacttccca
ctgaccaacatcgacaagatcaacggaagaaacccaaatgagattcgtgacagaatacaa
tttgaacatctcactccgctcttcccagaagagaaattcacactctgtggtgataaagca
acgaccaatctgtctacaagggtggtcgacctcttctctcctatcggcaaaggacagcgc
gcactcattgtggcacaacccaaaaccggtaagaccatcttgatgaaagacattgccaat
gccatcgctgccaaccaccccgaggcttatttgatgatgcttttaatcgacgaacgacca
gaggaagtgaccgacatggcgcgaactgtgaatgcagaggtcatcgcatcaacattcgat
gagccggcagaacgacatgttaagattgcaggaatcgtgcttgagaaagccaaacggatg
gttgaatgtgggcatgatgtggtgatattcctcgactctattacccgtttggcccgcgcc
tacaacacagtaagccctgcatcaggcaaggtattgaccggtggtgtggacgccaacgca
ttacaaaagccgaaacgattctttggtgcagcccgcaacatagaaggtggtggatcactc
accatcatcgctacagcactgattgacacgggcagtaagatggatgaggtaatcttcgaa
gagttcaagggtaccggcaacatggaacttcaattagaccggtcactttctaacaagcgc
atcttcccagctgtcaacctggttgcatcgagcacccgtcgtgacgacttgctacaagac
aagaccacactggataggatgtggattctgcgcaagtatattgccgacatgaacccaata
gaagcaatgaactcaattcatgacagaatgataagaacccacagcaatgacgagttcttg
atgtcaatgaactcatga
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