Peribacillus butanolivorans: DTO10_03430
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Entry
DTO10_03430 CDS
T06699
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pbut
Peribacillus butanolivorans
Pathway
pbut02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DTO10_03430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbut03021
]
DTO10_03430
Transcription machinery [BR:
pbut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DTO10_03430
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Exonuc_VII_L
DUF2316
NusA_N
DUF2408
Motif
Other DBs
NCBI-ProteinID:
AXN37553
UniProt:
A0AAX0RQH7
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All DBs
Position
complement(713354..714487)
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AA seq
377 aa
AA seq
DB search
MAEKPARSKQVDNEFSLEQVKEKLIELGKKRGSLTLEKIAEKIGGFELDSDQMDEFYEVL
AENGVEILTDGEEDEDEDDPDEKKLAKEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVDL
LSAEEEISLAMRIEEGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKA
VEKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLG
REPSPEEIAEDMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPSEHA
AYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKAL
RKLRHPSRSKRLKDFLE
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaaaccagcacgttccaaacaagttgataatgaatttagccttgagcaggtg
aaagaaaaattaatagagctaggtaaaaaacggggctctttaactttagaaaaaatcgca
gaaaaaattggcggttttgagttagattccgatcaaatggatgagttctatgaggtgtta
gctgaaaacggagtcgaaatactcactgatggtgaggaagacgaagatgaagatgatccc
gatgagaagaaacttgcaaaagaagaagagtttgacttaaatgatttaagtgttcctcct
ggcgtaaagattaacgaccctgtccgtatgtatttaaaggaaattggtcgcgttgacctt
ttatcagccgaagaggaaatctctttagcgatgcgaattgaagaaggagatgaagaagca
aaacgccgtttagctgaagccaacctgcgtcttgttgtcagtattgctaagcgttatgtt
ggacgcggtatgctcttccttgaccttattcaagaaggtaatatgggacttatcaaagcg
gtagaaaaatttgattatcgcaagggatacaaatttagtacgtatgcaacatggtggatt
cgccaggccattactcgtgccattgctgaccaagcaagaacgattcgaatcccggtgcat
atggttgaaaccatcaataaattaattcgtgttcaaaggcagcttcttcaggatcttgga
cgtgaaccatctccagaagaaattgcagaggatatggatttaactccggaaaaagttcgt
gaaatcttgaaaatagctcaggagcctgtttccttggaaacgccaatcggtgaagaagat
gattcccacttaggtgacttcattgaagatcaggacgcgacttctccatctgaacatgca
gcatatgaactattgaaagaacagcttgaagacgtattagacacactgacagatcgtgaa
gaaaatgtattgagacttcgctttggacttgatgacggccgtacacggacgcttgaagag
gtaggtaaagtgtttggagttacccgcgagcgtatccgtcaaattgaagcgaaagcatta
cgtaagctgagacacccaagtcgcagcaaacgcttgaaagacttcttagaatag
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