Peribacillus butanolivorans: DTO10_04195
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Entry
DTO10_04195 CDS
T06699
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbut
Peribacillus butanolivorans
Pathway
pbut03410
Base excision repair
pbut03430
Mismatch repair
pbut03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DTO10_04195 (recJ)
03430 Mismatch repair
DTO10_04195 (recJ)
03440 Homologous recombination
DTO10_04195 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbut03400
]
DTO10_04195 (recJ)
DNA repair and recombination proteins [BR:
pbut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
DTO10_04195 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DTO10_04195 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DTO10_04195 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AXN37692
UniProt:
A0AAX0RVK5
LinkDB
All DBs
Position
complement(872927..875302)
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AA seq
791 aa
AA seq
DB search
MLKPKTRWNLRTADENKVAELAEELHITPLVAALLVNRGLDTIESARSFLFVKNQTFHDP
FLLKDMDKAVYRIKEAIQNGEKIRVFGDYDADGVTSTTVMMTTLTRLGADVDFYIPNRFT
EGYGPNPMAFRLAAEQGVKVLITVDTGISAVDEAKLASELGMDYILTDHHEPGPELPEAL
AIIHPKLEDSSYPFEDLAGVGVAFKLAHALLGELPEDLLEIAAIGTIADLVPLKGENRLI
AAKGIEQLRLTRRPGLVALMKVANIQQEALNEESIGFAMAPRINAVGRLGDADPAVDLLM
SENLAEATELANEIDDINKERQAMVAAMAEEAIQEVEENYPPESNGVLIIGREGWNAGVV
GIVASKLVERFYRPTIVLSYDREKGHAKGSARSIAGFDLFESLSTCRELLPHFGGHPMAA
GMTLKIEDVQELRDRMNMIAKEKLSEEDFTPITNLDGATTLAEVSIQTIQEMSLLAPFGV
TNPKPKILIDSVQLSSVRKIGANQNHLKVQLEDSENHKLDGVGFGLGHYVDEIAPHAEVS
VIGELSINEWNNIKKPQIFVQDVSVNHWQLFDYRGKGQAEKWLAEIPVHNRKIVIFSEDI
YRRYPFLQNHPDLVLIKNEQEADQLDCMQGHVVLMDMPPLRELLKRMIENKKPSRIYAHF
SHEQDHFLSTVPTRDDFKWFYAFLAKKGPLDVKRYGDDLAKYRGWSRDTVDFISKVFFEL
DFVTIENGLIMLTANAKKRDLSESESFIRKKEQFELEQELVYSSYQQLFDWFNHFLVHEA
TDLEEETKQWI
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagccaaaaacgcggtggaacttgcgaactgccgatgaaaacaaagttgctgaa
ctagcggaagagcttcatatcacacctttagttgcggccttactagtgaatcgtggcctg
gatacaattgaaagtgcccgatcatttttatttgtaaaaaatcaaacttttcatgatcca
tttttactgaaagatatggataaagcagtatatagaataaaagaagccattcaaaacgga
gagaaaatcagggtttttggtgattatgatgcggacggcgtcacatcgactacggtgatg
atgacgacgctaactagactaggagccgatgtagatttttatatcccgaatcgatttaca
gaaggctacggtccgaatccaatggcattccgcttggcagctgagcaaggggtaaaggta
ttaataaccgtggacacgggaatttccgcagttgatgaagcgaaacttgctagcgagctt
ggcatggattatattttgacggatcaccatgaaccggggccggaacttcccgaagcacta
gcgattattcatccaaaacttgaggacagttcctatccatttgaagatcttgctggcgta
ggggttgcttttaaactggcacatgccttgcttggcgaactgccagaggatttgctggag
attgcggcaatcggtaccattgcggatttggtacctttaaaaggagaaaaccgcctcatt
gcagcgaaagggattgagcagttacgcttaactagacgtccagggcttgttgccctaatg
aaagtggcgaatattcagcaggaagcattaaatgaggaatcaatcggctttgcaatggca
ccacgaatcaatgcagttggccgccttggtgatgctgacccggctgttgatttattgatg
tctgaaaacttggcagaagcgacggaactggctaatgaaatcgatgatattaataaagag
cgtcaggcgatggttgctgcaatggcggaagaagcgattcaagaggttgaggaaaactac
ccaccggagtcaaatggtgtgcttattatcgggagagaaggctggaacgcaggggtagtg
ggtattgtagcctccaaactggttgaacgcttttaccgtccgaccattgtgttgagctat
gaccgagaaaaggggcacgcgaaaggttcagcccggagtattgctggattcgaccttttt
gagagtctctctacctgtcgcgaattgctgcctcattttggtgggcatccgatggctgcg
ggaatgaccctgaaaatagaagacgtacaggagcttagagatcgcatgaacatgattgcg
aaagaaaagctcagcgaagaagatttcacacctattaccaacttggatggagccacaaca
ttagcggaagtttccattcaaacgattcaggaaatgagcctactagcgccatttggagtg
accaatccaaagccgaaaatcttgatagattcagtccagctttcaagtgtccgtaaaatt
ggcgccaatcagaatcacttgaaggtgcagcttgaagatagtgagaatcataaactcgac
ggcgttgggtttggtctaggtcattatgtggatgaaatagctccgcatgccgaagtctcc
gtgatcggcgagctttccattaatgagtggaataatatcaaaaagccgcaaatctttgtt
caggatgtctcggtcaatcattggcagcttttcgattatcgcggcaagggacaggcagag
aagtggctagctgagataccggttcataatcggaaaattgttattttctcagaagatatt
tatagaagatatccttttttacaaaaccatcccgatcttgttttaatcaagaatgaacag
gaagcagatcaactcgactgcatgcaaggacatgtggttcttatggatatgcccccgtta
agagagttgttaaaacggatgattgaaaataagaagccgtcacggatatacgcacatttt
tctcatgaacaggatcatttcttaagtacggtgccaacacgggacgactttaaatggttc
tatgcctttcttgctaaaaagggtccgcttgatgtgaaaaggtatggtgatgatcttgcc
aaataccgaggctggtcaagagatacagtggattttatttcaaaggtgttttttgagctt
gattttgttacaatagagaatgggttaattatgctcacagccaatgcgaaaaaacgcgat
ctcagtgagtctgaatcgtttataagaaagaaagagcaatttgagcttgaacaagagctt
gtctattcttcctatcagcaattattcgattggttcaatcattttttagttcatgaggca
acagaccttgaggaggaaacaaagcaatggatttaa
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