Peribacillus butanolivorans: DTO10_11250
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Entry
DTO10_11250 CDS
T06699
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbut
Peribacillus butanolivorans
Pathway
pbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTO10_11250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbut03019
]
DTO10_11250
03009 Ribosome biogenesis [BR:
pbut03009
]
DTO10_11250
Enzymes [BR:
pbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DTO10_11250
Messenger RNA biogenesis [BR:
pbut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DTO10_11250
Ribosome biogenesis [BR:
pbut03009
]
Prokaryotic type
rRNA helicases
DTO10_11250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
AXN38936
LinkDB
All DBs
Position
complement(2345049..2346710)
Genome browser
AA seq
553 aa
AA seq
DB search
MTNFIDLGVSPAINAILKQIGISNPTPIQEKSIPDILAGRDVIAKAQTGTGKTLAFLLPI
LEKVDPTASHIQSLIVTPTRELALQITAELKKFANEIEELQVLAVYGGQDVEQQMKKLTR
NISVVVATPGRLLDHLRRGTIDLSQTQTLVLDEADQMLHIGFLPEVEEIMGQLPEERQTL
LFSATMPEQVHQLAKRYMNKPLTAAVKADQVTVEQIRQLVIETTDRAKQSSLITIIKEEQ
PYLAIIFCRTKRRVSVLNDALKSAGFNSEELHGDLSQAKRERVMKNFRDAKLQYLVATDV
AARGLDVEGVTHVFNYDVPEDAEIYIHRIGRTGRAGENGLAVTFIATKDLQLLSDIEKGI
SMKIERRTIEGVKMFQPDEAGHKKKRYEESSEEGTRRPRTGGGRRHRERIDTRGPNRGSH
RSANQADNRELELEKPRGGRTENSRGPKRENPRGGRTENSRGPKRENSRGGRPEDSRGPK
RENSRGGRPEDSRGPTKRENSRGGRPEDSRGPKRDNTRGDRQGDSRGAKGGNTQGPSNRR
GGSGSFSNRGRNR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatttcatcgacttgggcgttagcccggcgattaacgcgatattaaaacaaata
ggaatttctaacccgacacctatccaggagaaatccataccagatattcttgcgggaagg
gacgtcatcgcgaaggcacagacagggactgggaagaccttggcgtttttgttgccgatt
ttagaaaaagtcgatccgacagcatcccacatccaatcattaattgttacaccaactagg
gaattagctttgcaaatcacagcggaactgaaaaagtttgctaatgaaattgaggagctg
caggtgcttgctgtgtatggtggacaggatgtcgaacagcaaatgaaaaagttgacacga
aatatttctgtagtggttgccacgccagggcggcttttagatcatttacgaagaggcacc
attgatttatcgcaaacacagacactcgttctggatgaagctgaccaaatgcttcatatt
ggctttttaccggaagtagaagagattatggggcagcttccagaagaacggcagacattg
ctcttttctgccacaatgcctgaacaagttcatcagctagctaaacgctacatgaataaa
ccattaactgcggcagtaaaggctgatcaagttacagtcgagcaaatccgccaacttgtt
atcgagacgacagatcgtgccaaacagtcttcattaattaccataataaaagaagaacag
ccttacctggccattattttttgccgcacaaaacgccgtgtttcagtcttgaatgatgct
ttaaagtccgctggttttaattctgaggaacttcatggggatctttcacaggccaaacga
gaacgtgttatgaaaaacttcagagatgcaaagctccaatatttagtggcaacggacgtt
gcggcacgagggctggatgtagaaggagtgacccatgtatttaactatgatgtcccagag
gatgcggaaatttacatccaccgaattggtcgaacaggacgagcgggtgagaatggtcta
gccgtaacctttattgctactaaggatttgcagctgttaagtgatatagaaaaaggaatt
tcaatgaaaattgaacgaagaacaattgaaggcgtcaaaatgttccaacctgatgaggcg
ggtcataaaaagaagcgttatgaagaatcttcagaagagggaactcgtcgcccacgtaca
ggaggaggtcgccgccacagagagcggatagatacaagagggcctaatcgaggaagtcac
cgttctgctaatcaagcagacaaccgtgaattagagctagagaaaccacgcggaggtcgt
acggaaaatagtcgtggaccgaaacgtgagaatccacgtggaggtcgtacggaaaacagt
cgtggaccgaaacgtgagaattcaaggggaggacgcccagaagatagccgtggaccgaaa
cgtgagaattcaaggggaggacgcccagaagatagccgtggaccgacgaaacgtgagaat
tcaaggggaggacgcccagaagacagccgtggaccgaagcgtgataatacccgtggagac
cgccaaggagacagccggggagcaaaagggggaaatacccaagggccaagtaataggaga
ggcggatctgggagcttttcaaatagaggaagaaacaggtaa
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