Peribacillus butanolivorans: DTO10_11525
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Entry
DTO10_11525 CDS
T06699
Name
(GenBank) ATP-dependent helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pbut
Peribacillus butanolivorans
Pathway
pbut03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DTO10_11525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pbut03019
]
DTO10_11525
03009 Ribosome biogenesis [BR:
pbut03009
]
DTO10_11525
Enzymes [BR:
pbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DTO10_11525
Messenger RNA biogenesis [BR:
pbut03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DTO10_11525
Ribosome biogenesis [BR:
pbut03009
]
Prokaryotic type
rRNA helicases
DTO10_11525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
RHSP
Motif
Other DBs
NCBI-ProteinID:
AXN38986
LinkDB
All DBs
Position
complement(2404446..2405894)
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AA seq
482 aa
AA seq
DB search
MTELSFTDYTLSDEIVRALESLGYQQPTEVQREVIPFALKRKDLVVKSQTGSGKTAAFGI
PICDMVDWQENKPQALILTPTRELAVQVKEDITNIGRFKRIKATAVYGKSPFALQKAELK
QKSHVVVGTPGRVLDHIEKGTFVLERLTHLVIDEADEMLNMGFIEQVEAIIKELPKNRVT
MLFSATLPESIKKLCQKYMNDPLDIEIKATGITTEKIEHALIEVKEDDKFSLLKDVTITE
NPDSCIIFCRTKDRVDEVCEKLMDLDYPCDMIHGGMLQEDRLAVMNEYRRGEFRYLVATD
VAARGIDIDNITHVINYDLPLEKESYVHRTGRTGRAGKKGKAITFVTPYEDRFLKEIQSY
IGFDIPKISPPSEEDVSNKMNDFEAKLEARPKIKKDKSEQLNKQIMKLYFNGGKKKKIRA
VDFVGTIAKIDGVKAEDIGIITIQDNVSYVEILNEKGPLVLKVMKNTKVKGKLLKVSEAF
KN
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgactgaattaagttttactgattatacattaagtgatgaaattgtaagggcattggag
agtctgggttatcagcaaccaacggaagttcaacgtgaagtgattccttttgcattgaaa
agaaaggatcttgtcgtgaagtcgcaaacagggagtggtaagacagctgcatttggcata
ccgatctgcgatatggttgattggcaggagaataagccgcaggcacttattttaacacct
acgcgagagcttgctgtacaggtgaaagaggatattacgaatataggtagatttaaacga
attaaagcaacagcggtttatggaaaatctccatttgctctacaaaaagcagaacttaaa
caaaaaagtcatgtagttgtaggaacgccaggacgagtactcgatcatattgaaaaaggt
acgtttgttttggagcgcttaacacatttggttattgatgaagcggatgaaatgttaaat
atggggttcatcgaacaagtggaagccattattaaagagcttccaaaaaaccgagttacc
atgttgttttctgctactttaccagagagtataaagaaactttgtcaaaaatatatgaac
gatcctttagatattgagattaaggcaacgggcataacgactgaaaagattgagcatgcc
ctaatcgaagtgaaggaagatgataagttttccttgcttaaagacgttacaatcactgag
aatcctgatagctgcatcattttttgtcgaacgaaagatcgggtggacgaagtatgtgaa
aagttaatggatttagattatccttgcgatatgattcatggaggtatgcttcaagaagat
cgtcttgctgtgatgaacgagtacagaagaggtgaattccgctatttagttgctacagat
gtagctgcaaggggaattgacattgataatattactcatgttattaattatgatcttcca
ctagaaaaagaaagctatgtacatcgaactggaagaacaggtcgagctggtaaaaaaggg
aaagctattactttcgtgacaccctacgaagataggttccttaaagagattcaaagctat
atcggatttgacatccctaaaatctctcctccatcagaagaagatgtctcgaataagatg
aatgattttgaagcgaaactagaggctcgtcccaaaataaaaaaagataaaagtgaacaa
ttgaataaacaaatcatgaagctatattttaatggcggtaagaaaaagaaaatcagggcc
gttgatttcgtgggtacaattgcgaagattgatggtgttaaagccgaagatattggaatt
atcaccattcaggacaatgtttcctatgtggaaatattgaatgaaaagggaccacttgtt
ttaaaagtgatgaaaaatacgaaagtcaaaggcaagcttttaaaggtttcagaggccttt
aagaactaa
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