Peribacillus butanolivorans: DTO10_12325
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Entry
DTO10_12325 CDS
T06699
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pbut
Peribacillus butanolivorans
Pathway
pbut03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DTO10_12325 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbut03021
]
DTO10_12325 (rpoC)
03400 DNA repair and recombination proteins [BR:
pbut03400
]
DTO10_12325 (rpoC)
Enzymes [BR:
pbut01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DTO10_12325 (rpoC)
Transcription machinery [BR:
pbut03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DTO10_12325 (rpoC)
DNA repair and recombination proteins [BR:
pbut03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DTO10_12325 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_3
RNA_pol_Rpb1_2
RNA_pol_Rpb1_4
Iso_dh
Motif
Other DBs
NCBI-ProteinID:
AXN39112
UniProt:
A0AAX0S886
LinkDB
All DBs
Position
2564065..2567664
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPEKDGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTETGDTTLEKKQLLSEKEYRTYREKYGKKFQAAMGAEAIKKLLQ
DIDTEKEVESLKEELKTAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MAIELFKPFVMKELVQRGLAHNIKSAKRKIERLSPEIWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREGAIGEGMIFKDTSEALLAYQNGYVHLHSRCAVH
ASSLNNETFTEEQNSQLLITTVGKLIFNEILPKSFPYINEPTRYNLETKTPEKYFVEKGA
DIPELIKAQPAIDPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLKEKQEIITEAQTKVDNVLKQFRRGLITEDERYDRVISIWSAAKDTIQSKLMDSL
DRRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIIRDDDCGTDRGLKISALREGTEIIEHLE
ERLVGRYARKAIKHPETNEVIVAENDLITEDLANYIESLGIETAWIRSAFTCNTSHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAIISEIEGTVVSINEIRDKQQEIVVQGAVESRTYTAPYTARLRVAVDTAVRR
GEELTEGSIDPKELLKVTDVLTVQEYLLHEVQKVYRMQGVEIGDKHIEVMVRQMMRKVRV
LDAGETEVLPGTLLDVNQFTTANTDALLTSKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMLRYRKANPVVVGGESTDTVTVD
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgttagacgttaataatttcgagtatatgaaaattggtcttgcttcgccagacaagatt
cgttcttggtcccatggagaagttaaaaaaccagaaacaatcaactatcgtacgttaaag
ccagaaaaagacggtttattctgtgagagaatttttggacctcaaaaggactgggaatgt
cattgtggaaaatataaacgtgttcgttataaaggcgtagtttgtgaccgttgtggcgtt
gaagtcactcgtgctaaggttcgtcgtgaacgtatgggtcatattgagctggcagctcca
gtttcacacatatggtattttaaaggaattccgagccgtatgggacttgttcttgatatg
tctccgcgtgcattggaagaagttatttactttgcatcttacgtggtaactgaaacaggc
gatacaactttagagaagaaacagcttctttctgaaaaagaatatcgtacataccgtgaa
aaatacggtaagaagttccaagcagcgatgggtgcggaagctattaaaaaacttttacaa
gacattgatacggaaaaagaagtagagtcgttgaaagaagagcttaaaacagctcaagga
caacgcagaacccgtgcaattaaacgcttggaagtgctagaagcattccgtaactctggt
aatgaaccttcatggatgatactagacgtgctaccggttattccaccggaacttcgtcca
atggtacaacttgatggtggtcgttttgctacatctgatttaaatgatttatatcgtcgt
gttatcaaccgtaataatcggttgaaaagattattggaccttggagcaccaagcattatc
gttcaaaacgaaaaacgtatgcttcaagaagctgtcgatgctttaatcgataatggccgt
cgtggtcgtccagtaactggacctggtaaccgtccattaaaatctttatctcatatgtta
aaaggtaaacaaggccgtttccgtcaaaatcttcttggtaaacgtgttgattactctggt
cgttctgttatcgtagttggacctaacttaaagatgtaccaatgtggtctgccgaaagaa
atggcgattgaattattcaaaccattcgttatgaaggaactagttcaaagaggtttagcg
cataacatcaaatctgctaaacgtaagattgaacgactatctcctgaaatttgggatgtg
cttgaagaagttattagagaacacccggtactactgaaccgtgcaccgactcttcataga
cttggtattcaagcatttgaaccaactctagttgaaggtcgcgccattcgtttgcatccg
cttgtatgtacagcttacaatgctgactttgacggtgaccaaatggcggtccatgttcct
ttatcttctgaagctcaggcagaggctcgtatgctaatgcttgctgcgcaaaatattttg
aatcctaaagatggtaaacctgttgttacaccttctcaagatatggtattaggtaactat
tacttaacattggaaagagaaggcgctatcggtgagggtatgatctttaaagatacaagt
gaagcgttgcttgcataccaaaatggttatgtacacttacattcccgttgtgctgtgcat
gcatcatcactaaataatgaaacattcacggaagagcaaaatagccaactcctaataaca
actgttggtaaattgatcttcaatgaaattttaccaaaatcattcccgtatattaacgag
ccaacacgttataatttggaaacaaaaactccagagaagtatttcgtggaaaaaggcgct
gatatacctgaattgattaaggctcaacccgctattgatccattcaagaaaaaaattctt
ggaaatattattgcggaagtctttaaacgtttcaaaattaccgaaacttctaaaatgcta
gacaggatgaaagatcttggtttcaaatattcgacaaaagcaggtattaccgttggtgtg
gctgatattgttgttttaaaagaaaaacaagaaatcattactgaagctcaaacgaaagta
gataacgtcctaaaacaatttagacgtggtctaattacggaagatgagcgttatgatcgc
gttatctcaatctggagtgccgctaaggataccattcagtcgaaacttatggactctctg
gaccgacgcaacccaatcttcatgatgagtgactccggtgcccgtggtaatgcatccaac
tttacgcagcttgcgggtatgcgtggattgatggccaacccggctggacgtatcattgaa
ttaccgattaaatcaagtttccgtgaaggtttaacagtgttagagtactttatctctaca
catggtgctcgtaaaggtcttgctgatacagcacttaaaacagccgattccggttacctt
acacgccgactagttgacgtagcccaagacgttatcattcgtgatgatgattgtggtaca
gaccgcggcttgaaaatttctgccttgagagagggtacggaaataatcgagcatcttgaa
gaacgtctagtaggccgatatgcaagaaaagcgattaaacatccagaaacaaatgaagtg
attgtagctgaaaacgatcttatcactgaggatctggctaattatattgaatctcttggt
attgaaacagcatggattcgttctgcctttacatgtaacactagtcatggtgtatgtaaa
aaatgttatggacgtaacttggctactggtcaagaagttgaagtgggcgaagcagttggt
attattgctgctcaatcaatcggagaaccaggtacacagttaacgatgcgtacattccat
actggtggggttgccggagatgatattactcaaggtttacctcgtatccaagaaatattt
gaagcgagaaatcctaaaggtcaagctatcatttctgaaatcgaaggaacagttgtttcg
attaatgaaatccgcgataaacaacaggaaatcgttgttcaaggtgcagttgaatcacgc
acttatactgcgccgtacacagcgcgtttaagggtagctgttgatacagccgtacgtcga
ggcgaagagttaacagagggttcaatcgatccgaaagaattgctgaaagttactgatgta
cttactgttcaggaatacctgcttcatgaagtacaaaaagtataccggatgcaaggggta
gaaatcggtgataaacacatcgaggttatggttagacaaatgatgcgtaaggtccgtgtg
cttgacgctggtgaaactgaagttcttccaggaacattattggatgttaaccagtttaca
actgcgaacacagatgcattactgactagcaaattacctgctactggacgtcctgtatta
ctaggtattacaaaagcatctctagaaacggattccttcttgtccgcagcgtcattccaa
gaaacaactagagtcttgacggatgcagcaattaaaggaaaacgtgatgaattgcttgga
cttaaagaaaatgttatcatcggtaaacttgtccctgcaggaacaggtatgcttcgttac
agaaaagctaaccctgtcgttgttggtggcgaaagcacagatacagtaacagtagattaa
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integrated database retrieval system
