Peribacillus butanolivorans: DTO10_18420
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Entry
DTO10_18420 CDS
T06699
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pbut
Peribacillus butanolivorans
Brite
KEGG Orthology (KO) [BR:
pbut00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbut03400
]
DTO10_18420 (addA)
Enzymes [BR:
pbut01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DTO10_18420 (addA)
DNA repair and recombination proteins [BR:
pbut03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DTO10_18420 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
DEAD
ResIII
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AXN40144
LinkDB
All DBs
Position
3808252..3811977
Genome browser
AA seq
1241 aa
AA seq
DB search
MSKTIIPALPDDVTWTEDQWKAIWAKNQDILVAAAAGSGKTAVLVNRIIQKVVSEDDPID
VDELLVVTFTNASAAEMRHRVSEALEKAINENPHSQHLRKQLSLINRASISTLHSFCLEV
IRKYYYLTEIDPGFRIADSTEAQLLRDEVMEVLFEEQYGQSDNEEFFNLVDAFTSDRNDD
ALQNIVRSLYDFSRSNPDPNQWLNSAAAMYDLADDAGIDDLTFIESLKFDIGLQLDTAKD
LLERSLELTKVPGGPAPRAENYLADLDLVAKLSGVKDHSWNALYEEIQSVKFGTAKRCTG
ADFVKDIADEATKYRDKAKKIIKSLQEELFSRKPESYLRDIRELKGYVDTLVMLVKQFDE
RFFSAKAEKNLVDFADLEHYCLQILTEETVDGERKPSAAAIEYRKQFKEVLVDEYQDTNL
VQESILKLVTADGEYSGNLFMVGDVKQSIYRFRLAEPNLFLGKYTRFTHDGNESGLRIDL
NRNFRSRKEVLDGTNFLFQQLMGITVGEINYDEDAQLKKGAPYPEDKPNPIELHLIDGAE
SHSETEESEIGFEAEELEKAQLEARLMAKLIKKTINDKHQIYDMKTQQYRSATYRDMVIL
LRSMPWAPQIMEEFKKQGIPVYANLSSGYFEATEVAIMISLLKVIDNPQQDIPLASVLRS
PIVGMDEEEMSQVRLFHTGSYYEALADFYRKSDSDEHPGLYEKASSFYKKLVKWRKLARQ
EALSDLIWLLYRETQFYDFAGGMPGGKQRQANLRALYDRARQYEASSFRGLFRFLRFIDR
MQERGDDLGAARALGEQEDVVRLMTIHSSKGLEFPIVFIAGLSKQFNMMDLRKPYLLDKD
YGFAAKYVNSELRITYPSLPQLAFKKKKQLELIAEEMRVLYVALTRAKEKLYLIASISDV
EKMQHNWASNATHGDWLLKDYVRAGAKSYLDWIGPSLVRHRDFQGAAGPGWEMESHPSNW
SISVIPSEELAVLDDEEALAQEQLLEHVQKSEKVEMVSEFSQDIKEQLKWEYPEHEASVH
RSKQSVSELKRQYELKDEQSSTELLRKFKRPITKRPTFMQEKSLTPAERGTITHLVMQHI
DLSNEITIQSIKQLMVELIQRELLTDEQKEAVNPDTIVDFFDSDIGQRMQKAQSIRREVP
FTMSLPAKEAYSDWATGEEEILIQGVIDCIFEDEQGLVLLDYKTDTITGRFASGYEGAKE
ILADRYRMQLQLYTRAVEGILNKKVTSRYLFFFDGAHLLEV
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacaataatacctgcgcttccggatgacgttacttggacggaagatcaatgg
aaagcgatttgggcaaaaaatcaggacattctggttgcagcggcggcaggttcagggaaa
actgcggtgctagtcaatcgaattattcaaaaggttgtttcagaagatgatccgattgat
gttgatgaactccttgttgtgacattcacgaatgcttcggctgccgagatgcgtcacagg
gtcagcgaggcattagaaaaagcgattaatgaaaatccgcattcacagcatctgcgtaag
cagttgagcttgattaatcgagcttcgatctccacgcttcactccttttgtttagaggtg
attaggaagtattattatctgacggaaatcgacccaggctttcgaattgcggactctaca
gaggcacagctactacgtgatgaagtaatggaagtgcttttcgaagagcagtatggtcag
agtgataatgaagagttctttaatttggttgatgcttttacaagtgatcgaaacgacgat
gcacttcagaatatagtccgatctctctatgatttttcgcgatcgaatccagatccaaat
caatggctaaatagtgccgctgccatgtatgatctggctgatgatgcaggaatagacgat
ctgacatttatcgagtccttgaaattcgatattggtttgcagttggatacagccaaggat
ttattggagcgctccctcgaactcacaaaggtaccaggggggccagcaccaagggcagag
aactatttagctgaccttgatcttgttgccaaattatcgggagttaaagatcactcttgg
aacgctctttatgaagaaatccaaagcgtgaagtttggtacggcaaaacgctgcacggga
gcagactttgtcaaagatattgcggatgaggctaccaaatatcgtgataaggcaaagaaa
attataaaatcgttgcaggaagagcttttttctcgtaagcccgaaagttatctacgtgat
ataagagaactgaagggatatgtcgataccctggttatgctcgttaaacagtttgacgaa
agattcttctcagcaaaagcggaaaaaaacttggtcgatttcgctgatttggagcattac
tgtcttcaaatcttgacagaggaaaccgtagatggtgaacgaaagccatcagcagctgcc
attgaatatcggaaacagtttaaagaggtacttgtcgatgaatatcaggatacgaatcta
gttcaggaatcaattttaaaactggtgacggcagatggggaatatagtgggaatctgttt
atggtgggcgatgtcaaacagtcgatataccgtttcaggcttgcggaaccgaatcttttc
cttggaaagtacacacgctttacccatgatgggaacgaatccggtctgaggatcgattta
aatcggaatttccggagccgtaaggaagttctcgatggaacgaacttcttatttcaacag
ctgatggggattacagtcggtgagattaattatgatgaggacgcccagttgaaaaaagga
gcgccgtatcccgaagacaaaccaaaccctattgaactccatttaattgatggagcagaa
tcccattcagaaacagaagagtcggaaatcggattcgaggccgaggaacttgaaaaggcg
caactcgaagcaagattgatggccaagctcattaaaaagactataaacgataagcatcag
atatatgatatgaaaacccaacaataccgttctgcgacttatcgtgatatggtcattctc
cttcgttctatgccatgggcaccgcaaattatggaagaatttaagaagcaggggattcct
gtttatgctaacttgtcatcaggatattttgaggcgacagaagtagcaatcatgatttcc
ttattaaaagtgattgataatccccagcaggatattcctttggcttccgttttgcgttca
cctatcgtcgggatggatgaagaagagatgtcgcaggtccgtttattccatacaggtagc
tattatgaagcattagctgatttttacagaaagagtgactcagatgagcatcctgggctt
tatgaaaaagcttcatcattttataaaaagctagtaaagtggcgaaagcttgccaggcag
gaggcgttgtccgacttaatctggttgctgtatcgtgaaactcagttctatgattttgca
ggaggaatgccgggtggcaaacagcgtcaggccaatttaagggcattgtacgacagggca
aggcaatatgaagcgagttcattccgtggtctgtttcgttttctgcgtttcattgataga
atgcaggaacgtggagatgatttaggggcagctcgggctttaggtgaacaggaagatgta
gtccgcctgatgacgattcactcctcaaagggtctggagtttccgattgtgtttattgcc
ggactttctaaacaattcaatatgatggatttacgaaagccttatttactggataaggat
tatggttttgcggctaagtatgtgaattctgaattgcggataacgtatccatcccttcca
cagttggcttttaagaagaagaagcagcttgaattaattgcagaggagatgcgtgtcctc
tatgttgcgcttacaagggctaaggaaaagctgtatttaattgccagtatcagtgatgta
gaaaaaatgcagcataattgggcaagtaatgcgacacacggtgattggttattaaaggac
tatgtacgagcaggtgcaaaaagctatcttgattggatcggtccatcccttgtccgtcat
cgagactttcagggggcagctggtcctggctgggaaatggagtcacatccatcaaattgg
tccatctctgtcattcctagtgaagagctggcagttctggatgatgaagaggcactcgca
caagagcaattactagagcatgttcagaagtcagagaaggtcgaaatggtttccgagttt
tctcaggatatcaaggaacagcttaaatgggagtacccagaacatgaggcttccgtgcat
cgttccaagcagtccgtttctgaactaaaacgtcaatatgaactgaaggatgagcaaagt
tccacagagttgttgagaaaatttaagcggccaatcacgaagcgtccgacttttatgcaa
gaaaagtcactaactcctgctgaaagaggaacgattacccatttagtcatgcagcatatc
gatttatcaaacgagattaccattcaatcgattaagcaattgatggttgaactgattcaa
cgcgagttgttgaccgacgaacagaaagaagctgtgaatccggatacgattgttgatttc
tttgacagtgatatcggtcaaagaatgcagaaggctcaaagtattcgccgtgaagtacca
tttacaatgtcattgccggctaaagaggcttacagtgattgggcaactggagaagaggaa
attctgattcagggtgttattgattgtatttttgaggatgaacaagggcttgtgttgctt
gattataaaacggatacaataaccggtcgttttgctagtgggtatgaaggggcaaaagag
attcttgccgatcggtaccggatgcagctacagctttacacaagggctgtcgaaggaata
ttaaataaaaaagtaacgagccgttatttatttttcttcgatggagcgcatttattggaa
gtataa
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