KEGG   Peribacillus butanolivorans: DTO10_20880
Entry
DTO10_20880       CDS       T06699                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
pbut  Peribacillus butanolivorans
Pathway
pbut03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pbut00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DTO10_20880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pbut03019]
    DTO10_20880
Messenger RNA biogenesis [BR:pbut03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DTO10_20880
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 P8
Other DBs
NCBI-ProteinID: AXN40595
UniProt: A0AAX0S4A0
LinkDB
Position
4314521..4316191
AA seq 556 aa
MGKDKNNGIKVISLGGQGELGKNMYVIEVNEDLYLLDAGLMLPEEEMLGIDAVIPDISYL
MDNKERVQGIFITHGHEDHMGALAYVLKYLPVPVYGTKLTLALIKTKLKEDGFNGRATFT
EIDSDSLLSFPQAAVSFFRTNHSIPDSVGVVIHTRDGAIVYTGDFKFDQAATDLYKPEIG
KMASIGEEGVLCLLSDSTGAERPGYTPSEAVVSRDITEAFHAASGRIIVACFASNINRIQ
HVFNAAAASRRKVAVVGKSLQRVYETALNLGYLKVEEELIIPVNEINKYDDREIVVLSTG
HQGEPIAALQKMAKQTHKQVTIKKGDTVLISASPLQGGELILSKTVDLLYRVGAEVVSAS
KYKVHVTGHGSQEELKMMINLMNPKFLIPVHGEYRHLYAHQKVGIAAGIKRENIVIAEKG
DVIELKGDKMGLSGKVTAGNILIDGSGVGDVGNIVLRDRRLLSQDGILIVVVTLNRQDKS
IAAGPEIISRGFVYVRESEKMIGEATEIVSEIVKKNGSRQPFDWSTLKQEMRDALNQFFY
EKTKRRPMILPIIMEY
NT seq 1671 nt   +upstreamnt  +downstreamnt
ttgggtaaagataaaaataatggaataaaagttatttctcttggaggacaaggggaactt
ggtaaaaatatgtacgtcattgaggtaaatgaagacctctaccttcttgatgcaggatta
atgctgccagaagaagaaatgttgggaattgatgcggtaattcctgacatttcttatttg
atggataataaagaacgggtacagggtattttcattacccatggtcatgaagaccatatg
ggtgcgcttgcttatgtattaaaatatttaccggtacctgtttacggtacaaagcttaca
cttgctttaatcaaaacaaaattaaaggaagacggctttaatggcagggcaacatttact
gagatcgattcagattctcttttaagtttccctcaagctgccgtatcctttttcaggaca
aaccatagtattcccgattctgtcggagttgtaatccatacgcgtgatggagccatcgtc
tatacaggggatttcaaatttgatcaagctgcaaccgatctttataaaccagaaatcggt
aaaatggcaagtattggagaagagggtgtcctttgcttgctatctgatagcacaggcgcg
gaaagaccgggttatacgccatctgaagcagttgtgtcaagggatattacagaagccttc
catgcagcttctggaagaattattgttgcttgctttgcttcaaatattaatcgaattcag
catgtcttcaatgcagcggccgctagtcgaaggaaagtggctgttgtgggtaaaagcttg
caacgtgtctatgaaacagccttaaatcttggatacttaaaggtcgaggaagagctgatt
atcccggtcaatgaaattaacaagtatgatgatcgtgaaatcgttgtattatcgactggg
catcaaggtgagcctattgcagcgcttcaaaaaatggcgaaacagactcataagcaggta
acgattaaaaagggagatacagtcttgataagtgcatcccccttacagggcggcgaactt
attttatcgaaaaccgtcgacttactttaccgggtaggtgcagaggtagtatctgctagt
aaatataaagtgcacgtaacgggtcatggcagtcaagaagaactgaaaatgatgattaac
ttgatgaatcctaaattccttatcccagtacatggagaataccgtcatttatatgcccat
caaaaagtaggaattgctgcagggataaaacgggaaaatatcgtgattgctgaaaaaggt
gatgtcatcgaactaaaaggtgacaaaatgggcctatccggcaaagtcactgcaggaaat
atcttaattgacgggagcggtgttggagatgtgggtaatatcgtactccgtgatcgtcgc
ttgttatcacaggatggcattttaatcgtcgttgtcacattgaaccgtcaagataaaagt
attgcagctggcccggaaatcatttcacgaggtttcgtatatgtacgtgaatcagaaaaa
atgattggggaagctactgagattgtaagtgaaatcgtgaagaaaaatggatcgcgccaa
cctttcgattggtctactctgaaacaggaaatgcgtgatgccttaaatcaattcttctat
gaaaaaacgaaacgccgtccaatgattttaccaataatcatggagtattaa

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