Paenibacillus bovis: AR543_03365
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Entry
AR543_03365 CDS
T04407
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pbv
Paenibacillus bovis
Pathway
pbv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AR543_03365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pbv03021
]
AR543_03365
03019 Messenger RNA biogenesis [BR:
pbv03019
]
AR543_03365
Transcription machinery [BR:
pbv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
AR543_03365
Messenger RNA biogenesis [BR:
pbv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AR543_03365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
ATPase_2
OB_RNB
AAA_22
Spore_III_AA
S1CSD-TOTE-2
Mor
NACHT
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ANF95168
UniProt:
A0A172ZC25
LinkDB
All DBs
Position
782828..784189
Genome browser
AA seq
453 aa
AA seq
DB search
MDLQISDLEEMKLTDLYKLAKQYQIPYYGQLKKKELIFAILRAQAERSGLMFMQGVLEIL
PEGYGFLRPINYLPSAEDIYISASQIRKFDLRTGDLVSGKCRAPKENERYFGLLQVNAVN
GISPEQAAERLHFPALTPLYPQKKLVLETAPNKLSTRIMDVLAPVGLGQRGLIVAPPKAG
KTLLLKEIANSISTNNPEIELFVLLIDERPEEVTDMQRSVKGEVIASTFDELPENHIKVA
ELVLERALRLVEHKKDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFGS
ARNVEEGGSLTILATALIDTGSRMDDIIYEEFKGTGNMELHLDRKLSERRIFPAIDIRRS
GTRREEDLLAKEELDTIWHIRKNMNDSQDFVEGFLKKLRNSKTNQEFLATFDTREDSKNG
SSGAKKSSPSSSTGSGNTGRRTTRSTTASATTN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaatttccgatttggaagaaatgaagctgaccgacttgtacaaactggcc
aagcagtaccagattccgtattatgggcagctcaaaaaaaaggaattgatctttgcaatt
ctacgtgcgcaggctgaacgcagtggacttatgttcatgcagggcgtacttgaaatactg
cctgaaggatacggattcctgcggccgatcaattatttgccaagtgcagaggatatttat
atttcggcttcacagattcgcaaattcgatctgcgtaccggagacctggtatccggtaaa
tgccgggcacccaaagaaaacgaacgttatttcggacttcttcaggttaatgccgtaaac
ggtatcagtccggaacaagcagcagaacgccttcatttccctgcgctgactcctctctac
ccgcaaaagaagctggttcttgagacagctcccaacaaactctctacacggatcatggat
gtactggctccagtcggactgggacagcgtggtctgatcgtagcacctcccaaagccggt
aaaacactcctgctcaaagaaatcgcgaacagcatctcaacgaacaatccggagattgag
ctttttgtgctgcttattgacgagcgtccggaggaagtgacagatatgcagcgttcggtc
aaaggtgaagttattgcttctacatttgacgaattgcccgagaatcatatcaaagtagcc
gagctggtgctggagcgtgcactgcgtcttgtcgaacacaaaaaagatgtcgttattctg
atggacagtatcactcgtctggcacgtgcctacaatctggtgattccgccatccggtcgt
acactgagcggtggtattgatccggcagctttccatcgtccaaagcgctttttcggttct
gcccgtaatgtagaggaaggcggtagtctgaccatcttggcgacagcgctgatcgacacc
ggctcccgtatggatgatatcatttacgaagaattcaaaggtactggtaatatggagctg
catctggaccgtaaactgtccgagcgccgtattttcccggcgatcgatatccgccgttcg
ggtacacgccgcgaagaagatctgcttgccaaggaagagctggataccatctggcatatc
cgcaaaaatatgaacgatagccaggactttgtggaaggcttcctcaaaaagctgcgcaac
tctaagaccaatcaggagttccttgctacatttgatacccgggaagatagcaaaaacggc
agttccggtgccaagaaatcttcgccttcgtccagtaccggttccgggaacacgggtaga
cgtacgacccgttccactacggcttccgcgacaaccaactga
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