Paenibacillus bovis: AR543_08220
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Entry
AR543_08220 CDS
T04407
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pbv
Paenibacillus bovis
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pbv03016
]
AR543_08220
Enzymes [BR:
pbv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AR543_08220
Transfer RNA biogenesis [BR:
pbv03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AR543_08220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
ANF95993
UniProt:
A0A172ZER5
LinkDB
All DBs
Position
1952087..1952659
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AA seq
190 aa
AA seq
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MGTQPGQERVFAAVPIKGEAAITLSAWSRAAQEQYAFRRWTYAGDLHITLQFFGDVDVEQ
LPELCTALQKAAAGIAPFQLQLGLAGIFGNPLAPRVLWIGPEGDTDSLHHLQSEVQQACL
PLGFVPEQRPYHPHLTVARKYHGSTPFSEINADHYPSPDHWRVEEFVLYRTRLGQQPMYE
VAGQFPLLGL
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgggaactcagcctgggcaggaacgtgtatttgcagctgtgccgatcaagggtgaagca
gcgataacattgagcgcatggagcagggcagcgcaggagcaatatgcgttccgccgctgg
acttacgctggggatctgcatattacactccagttttttggagatgtagacgtggagcag
ctaccggagctgtgtacagctctgcaaaaggctgctgccggcattgcaccgtttcagctg
cagctgggactggccgggatattcggcaatcccctggctccgcgagtactgtggattgga
ccggaaggagatacggatagtctgcatcacctgcagtccgaggtgcagcaggcttgtcta
ccgcttggctttgtaccggagcagcgtccgtatcatccccatctgaccgtagcccgcaaa
tatcatggcagtacgccgttttcggaaataaatgcagatcattatccatcaccggatcac
tggcgggtagaggaatttgtactgtaccggacacgtttgggtcagcaaccgatgtacgaa
gtggcaggtcaatttccgcttctcggattatga
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