Paenibacillus bovis: AR543_09815
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Entry
AR543_09815 CDS
T04407
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pbv
Paenibacillus bovis
Pathway
pbv03030
DNA replication
pbv03430
Mismatch repair
pbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AR543_09815
03430 Mismatch repair
AR543_09815
03440 Homologous recombination
AR543_09815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbv03032
]
AR543_09815
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_09815
Enzymes [BR:
pbv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AR543_09815
DNA replication proteins [BR:
pbv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AR543_09815
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AR543_09815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF655
GAAD
HROB
SSB
Motif
Other DBs
NCBI-ProteinID:
ANF96268
UniProt:
A0A172ZF76
LinkDB
All DBs
Position
2317816..2321604
Genome browser
AA seq
1262 aa
AA seq
DB search
MTPFVHLHVHSEYSLLDGAARIQDLVASAAAAGMTSLALTDHGVMYGAIPFYKACLQHGI
KPIIGCEAYYTAGSRKEKAARKDQPIHHLLLLAKNETGYRNLMKLCSVGHLEGFHYKPRI
DAEALQQYHEGIICLSACLGGEIPQHLLHGQLDEARKAALRYQQIFGEDFYIELQDHGLA
EQKKVTPLLIELARELNIPLVATNDVHYLTEEDAKTQDVLICIGTGKTVEDESRLRIPTN
QLYLKNGEQMAALFRYVPEAIENTATIADKCHLELTFGTSLLPAYHPLPEGMNAGAYLAQ
LCQEGLIRRYEKTPLWNDPEERQGLEERLAYELSVIGNMGFDDYFLIVWDFMNYAHRQGI
ATGPGRGSSAGSLVAYVLQITNVDPIRYKLLFERFLNPARVSMPDIDIDFSDLRRDEMID
YVVEKYGRDRVAQIITFGTLAARAAVRDVGRALNVPYTDTDKAAKLIPAQIGVTIQRSLD
QVPELKERYAKSAPVREMIDTALKVEGMPRHASTHAAGVVISSGPLTDVVPLQEGSEHAV
LTQYTMENLEAIGILKMDFLGLRTLSIIERCLEWVKEQTGENIDFDRIPVDDPETYRMLS
QGDTMGVFQLESPGIRRVLRDLKPSEFEDIVSVNALYRPGPMDFIPRYIEAKHGRAVPEY
PHNDLKPILEDTYGIIVYQEQIMQIASTMAGFSLGEADLLRRAVSKKKREVLDQEREHFV
QGSLQQGYTEQDANVVYDMIVRFADYGFPRAHATAYGVLAFQTAYLKAHYPVQFIASMLT
AVMGTHRKVAEYVLECQRVGVEVLPPDVNTSGITFTPVLEDLALPHQLGENPAEDVTEHA
QLSRENSDSNRDRLEANSIGDQTVESAQITGHIRFGLGAVKNVGTQAINSIIKERAERPF
DSLVDFCRRVDPKACNKRVIESLIQAGAFDTLPGHRAQLLQMLDETIKEAAKWRKEREEL
QIEMFDFDLGEKPNWEVSYPDIPPFTSGEQLEFERELLGLYLSGHPLDDYERAIEESGLS
RLMNLHEAEDDSMVAVAGMVVSLKAITTKQGKSMAFMEMEDQIEKCEVVMFPEVWRKYNE
LVDKGVLLVIRGRLQKQEEEGFKLLAEEAVPLTPASAGEMAEKARQRRSKAPAGASSASR
RPAAKSNTQPAAAGTGRASSAGGASASPASSSSGSKAAVEQNSTSKPSQTVYIKITREAQ
QAGRLEQLKQLLSSHPGQLGTVLFYEESQKLLDLSDSYRIKPSPALFQEMEQMLGEGTVK
VK
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatttgtacatttgcatgtgcatagtgaatacagtctgctggacggggctgcg
cgtatccaggatctggtcgcgagcgcggcggcggcagggatgacttcgctggcactgacg
gatcatggcgtaatgtatggtgccatcccgttttacaaagcctgcctacagcatggcatc
aagccgattattggctgtgaggcgtattatacggccggatcacgcaaggaaaaggcagca
cgcaaagaccagcctattcaccacttgttattactggccaaaaatgaaacaggctaccgg
aacctgatgaagctctgctctgtcggtcatctggaaggttttcattataaaccgcgtatc
gatgcggaagcactgcagcagtatcatgaaggaattatttgtctcagcgcctgtcttggc
ggagaaattccgcagcatttgctgcatggacaactggacgaagcgagaaaggcagcgctg
cgttaccagcagatttttggagaagacttttatatcgagctgcaggatcacggtctggct
gaacagaaaaaggtcacaccactgctgatcgaattggcacgtgaactgaatataccgctt
gtagcaaccaatgatgtgcattatctgaccgaagaggatgccaaaacgcaggatgtactg
atctgtatcggtaccggcaaaacggtagaggatgagagccgtctgcgtatcccgaccaat
caactgtatctcaaaaatggcgagcaaatggcagcactgttccgctatgtaccggaagcg
atcgaaaatacggctactattgcagataaatgccatttggagcttacttttggcacttcg
ctgctgcctgcttaccatccgctgccggaaggcatgaatgcaggtgcctacctggcgcag
ctgtgtcaggagggtctaatccggcgctacgaaaagactcctttatggaatgatcccgaa
gagcgtcagggactggaagagcgactggcttacgaactatcggtaatcggtaatatggga
tttgacgattactttctgatcgtatgggattttatgaattatgcccatcgccagggaatc
gctaccggaccggggcggggatcgtctgccggtagtctggtcgcttatgtattgcagatt
accaatgtggatccgatccgctacaagctgctgtttgagcgtttcctgaatccggcgcgg
gtatctatgcccgatatcgatatcgacttcagcgacctgcgccgggatgaaatgatcgat
tatgtggtggaaaaatacggacgtgaccgggttgcgcagattattacttttggtacgctg
gctgcgcgcgccgcggtacgggatgtgggacgtgcgctgaatgtaccttataccgatacc
gacaaagcagccaagctgattccggcacaaattggtgtaacgattcagcgttcacttgac
caggtaccggaattaaaagaaagatacgccaaatccgcgccggtacgcgaaatgatcgat
acggcactcaaggtcgaaggcatgccgcgtcatgcgtctacccatgcggcaggcgttgtt
atttccagtggtccattgactgatgtcgttcctctgcaggaaggcagtgagcatgcggtg
ctgacacagtatacgatggagaatctggaagcgatcggtatacttaaaatggatttcctg
ggtctgcgtacattgtccattatcgagcgctgtctggaatgggtgaaggaacagactgga
gagaacattgattttgaccgcattccggtcgatgatccggaaacttatcgaatgctcagc
cagggtgataccatgggcgtgttccagctggagtctccgggtattcgcagagtgctgcgt
gatctgaagccgagcgaatttgaagatatcgtctcggtcaatgcgctgtatcgtccgggt
ccgatggactttattccacgctacatcgaagccaagcatggccgcgctgtaccggaatat
ccgcataatgacctgaagccgattctggaagatacgtatggcattatcgtctaccaggaa
cagattatgcagattgcttctactatggcaggattttcactaggagaagcggatctactg
cggcgagccgtatccaagaaaaagcgggaagtgctcgatcaggaacgcgaacactttgtg
cagggcagtcttcagcaagggtataccgagcaggatgccaatgtcgtgtacgatatgatt
gtgcgttttgccgattatggattcccgcgtgctcatgcgacggcttacggtgtgctggct
ttccagaccgcctatctcaaagctcattatccggtacaatttatcgcctctatgctgact
gcggtaatgggaacgcatcgcaaagtggcggagtatgtgctggaatgccagcgtgtcggt
gtcgaggtactgccgccggatgtgaatacgagcggaattacctttaccccggttctggaa
gatttggctctaccacatcagctaggagagaatcctgctgaagatgtaacggaacatgcg
cagctatcccgggaaaattcggatagcaatcgggatagactggaagctaattctattggt
gaccagacagtggaatcagcacaaatcaccgggcatatccgttttggactcggtgcggtc
aaaaatgtcggtacccaggcgatcaacagcattatcaaggaacgcgcagagcgtccattt
gatagtctggttgatttctgtcgccgcgtagaccccaaagcctgcaacaaacgtgttatc
gaatccctgatccaggccggagcatttgacacgttgccaggacatcgcgcccagctgctg
cagatgctggatgagacgatcaaggaagcagccaaatggcgcaaggaacgcgaggagctg
cagatcgagatgttcgattttgatcttggcgagaagcccaactgggaagtctcgtatccg
gatattccgccatttacatctggcgaacagctggaattcgagcgcgagctgctggggcta
tatttatcgggtcatccgctggatgattatgaacgggcgattgaagagtctggtttgtcc
aggctgatgaacctgcatgaagccgaggatgacagtatggtagccgtagcagggatggtc
gtttcgctcaaagcgatcacgaccaagcagggcaaatcgatggcctttatggaaatggaa
gaccagatcgaaaaatgcgaggttgtcatgttccccgaggtatggcgtaaatataatgag
cttgtggataaaggggtactgctcgtaattcggggaagacttcaaaaacaggaagaagaa
ggcttcaagctgcttgccgaggaagcggtgccgctcaccccggcatccgctggcgaaatg
gccgaaaaagcacgccagcggcgcagcaaagcaccagccggtgcttcatcggcatcccgg
cgcccggcagctaaaagcaatacacagcctgcagcagcaggtacaggcagagcttcttcc
gctggtggcgcttcggcttctcctgcgtcgtcttcctccggcagcaaagctgctgtcgaa
cagaatagtacaagcaaaccaagccagaccgtgtatatcaaaattacccgcgaagcccag
caggcaggacggctggagcagctcaaacagctgctttccagtcatcccggtcagctcggt
accgtccttttttacgaggaaagccagaagctgttggatctgagcgacagctaccggatc
aagccatcgcctgcgctgttccaggaaatggaacaaatgctcggcgaaggcactgtaaaa
gtcaagtga
DBGET
integrated database retrieval system
