Paenibacillus bovis: AR543_15240
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Entry
AR543_15240 CDS
T04407
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pbv
Paenibacillus bovis
Pathway
pbv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR543_15240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_15240
Enzymes [BR:
pbv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AR543_15240
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AR543_15240
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AR543_15240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ANF97219
UniProt:
A0A172ZI70
LinkDB
All DBs
Position
complement(3619875..3620699)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPELENYKIQLTGYILNVAIEKMVVHRPKATNMEADHVNLMLAGNRVAFIERRGKYL
NLHLHSGHRLLISIVLGSSLYYGIREQNADRKSDVELQFEDGTSLYYTAGRQGLMYFCSA
KETQAYFADLGPEATDRKLTREQFITLFKSRRGALKTALINQSLIAGIGSYYADEIAFTA
GLLPSAKVQDLDEEALSKLYDAVHSVLEEAIETGGHMEGQPLTANDALTGGFHALRRVYE
REGEPSVRSATDKVVKTEVAGKKTYYCPASQFEQ
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccagaactcgaaaattataaaatccaactgacaggttatattttgaat
gtcgctattgagaaaatggttgtacatcgtcccaaagctaccaatatggaagctgatcat
gtcaacctgatgctggcgggtaaccgggttgcttttatcgaacgccgtggtaaatatctg
aatcttcatcttcacagcggacatcgtctgctgatcagcatcgtactgggaagttcgctg
tattatggtattcgcgagcaaaatgcagatcgcaagtcggatgtggagcttcaatttgaa
gatggaacgtcgctgtattatacagccggacgtcaaggattgatgtatttctgctccgcc
aaggagacacaggcctatttcgccgatctgggaccggaagcaaccgatcgcaaactgacc
agagaacaattcattactttgttcaaaagccgcagaggcgctctcaaaacagcgctgatt
aatcaatctttgatcgctggcattggcagctattatgcagatgagattgcttttacagcg
gggctactgccttcagccaaagtacaggatctggacgaagaagcattgtccaaactgtat
gatgcagtacacagcgttctggaagaagcgatcgagacaggcggccatatggaagggcag
ccgctcacagccaatgatgcgctgacgggtggattccatgcgctgcgccgtgtgtatgag
cgtgaaggtgaaccgtctgtacgctctgcaacagacaaagtggtaaaaaccgaagtggca
ggcaaaaaaacctactactgtccagcatcccagtttgaacagtaa
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