Paenibacillus bovis: AR543_18155
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Entry
AR543_18155 CDS
T04407
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pbv
Paenibacillus bovis
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_18155
Enzymes [BR:
pbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AR543_18155
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AR543_18155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ANF98894
UniProt:
A0A172ZML4
LinkDB
All DBs
Position
complement(4282318..4286358)
Genome browser
AA seq
1346 aa
AA seq
DB search
MPRPIDSTWTEDQWKAISLRGGNMLVAAAAGSGKTAVLVERIIRQVTDTAHPLDVDRMLV
ATFTKAAATEMRQRIRAALDKEVLQRPEDERLRRQLALLGQASITTLHSFCLEVIRRYYS
LIPLDPGFRIASENESRLLRQELLEELFEEKYGEEEERDSKQFHRLMNWFGGERSDDAAI
VLVERLYHFARSHPWPEHWLRQTAAHFEAADGAALQNTPWVSYIMQDIRVSLEGMEALLR
QGIDTARLPGGPAAYADSLNEDLELIHQLQDAVMQQPWTALYLTFQNAGFGKLKAVRKEG
IDPNLQETVKQLRENAKKSLADLKTSFFGRTPDEFAQELREAAPLMSELSELVIRFSDKY
QQEKQRRGWVDFSDLEHYALQILRDPASVPDHVLPSAAALEYQERFDEVMLDEYQDTNSV
QEQLIRLISRSEQGNRFMVGDVKQSIYRFRLAEPRLFMEKYHTYSEDWQGEGRRIDLSRN
FRSRQQVVDAVNMIFRQVMNEKVAEIRYDERAELVAGAQYPPGEEKAYAPEFWLIDRAGA
ERTADNEDPAELPAGSAADEAELEAARLEAQAIAARVREMVSPDGRPLMIYDKSVDGLRP
AEYRDMVILLRSVSIWAPMIVEELQLLGIPAYSDLEQGYFEAVEVDIMLSLLEIIDNPQQ
DIPLASVLRSPIVGLNEDELAAIRLFGKDISYYDAMLLASEQAEEHPGSWNSKLLRFMEQ
LSNWRARAREEELGELIWRIYRETGYVDWLGGLPGGIQRQNNLRILYDRARQFERSTSSR
GLFRFLRFIRRLKDNGGDLGSAVSGTQENAIRVMTIHKSKGLEFPVVFLAGMSKMFNMQD
LNASFLMHKELGFGPKFVDEDTRVSYPTLPNLAIRRQALNELLAEEMRVLYVALTRPRDK
LIMIGTVRGLDKKISAWSQIQNSEQLELPDYLLARGRSYLDWLGLAMMRHRSAAIFRERN
EAAAGPYSDCLAADPSDWQIRIIDSRELRVADENDELSYAGPRDNDPKWQALREKSEVTL
SQIRDHLDTDTDTDTDTDTDTDTDTDTDTDTDTDTDTDNWQSIVYDRLSWQYPYENAVHT
PAKTTVSELKRQLATEDAPDADLWEGIWNLQPLLNSFANRKAETNDTEASLSSSEPIAAA
DNDIAVDAIADSQTSSLYNDGTLKLQRPKFMEKRGLSGAERGTAYHTMMQRIPLQAGPID
TALVDQIRDQLVQLQILTQPEANAVKTADITAFFASELGQRLIHSEWIRREMPFSYGIPV
NEQNDIMLTQGIVDCLFREGEQTILIDYKTDRIAAHEGGLESLEQRYRLQLELYAQAVEE
SLGQPVNELWLYFFDGARAVRLNADK
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaccgatagacagcacctggactgaagaccaatggaaagccatctccctgcgt
ggcggcaatatgctcgtcgctgctgcagccggctccggcaaaacagcagttctggtggag
cggatcattcgccaggtgacggatacagcacatccacttgatgtagatcggatgcttgta
gctacctttaccaaagcggcagcgaccgagatgcgtcagcggattcgggctgcactcgac
aaagaagtgctacagcgtccggaggatgagcgattgcgccgtcaattggcgctgctgggt
caagcttcgattacgacgctgcactccttttgcctggaagtgattcgtcgttattattca
ctaattcctctggaccctggatttcggattgccagcgagaatgaaagcagactgctgcgt
caggaacttttggaagaactgttcgaagaaaaatatggcgaagaagaggaacgcgattcc
aagcagtttcatcgtctgatgaactggttcggcggagagcgaagtgatgatgcagcgatt
gtactggttgaacggctgtatcattttgcccgcagtcatccatggcccgagcactggttg
cgtcagacagctgcccatttcgaagctgccgatggagcagcgctgcagaatactccgtgg
gtgagttatattatgcaggatatcagagtatcgctggaaggcatggaagcactgctgcgt
cagggaatagacacggcgcgcctgccaggcggtccggctgcttacgcagacagcttgaat
gaagatctggaattgattcatcagctccaggatgcagtgatgcagcagccgtggacagca
ttgtatctgactttccaaaatgccggattcggcaagctcaaagctgtacgcaaggaaggc
attgatcccaatctgcaggagaccgtcaagcagctgcgggaaaatgccaaaaaatcgttg
gcagatctgaaaacgtccttttttggacgtaccccggatgaatttgcccaggaattgcgc
gaagcggctcccttaatgagcgaactgtccgagctggttattcgatttagcgataaatat
caacaggagaaacagcgtcgcggttgggtcgatttttccgatctggagcattatgccctg
cagattctgcgcgatccggcatctgtgcctgatcatgtgctgccttctgcagccgcgctg
gagtatcaggagcgattcgatgaagtcatgctggatgaataccaggataccaactcggtt
caggaacagctgattcgtctgatttcccgttctgaacaggggaatcgctttatggtaggt
gatgtgaagcagagcatttatcgcttccgtctggctgaaccgagattatttatggaaaag
tatcatacctatagtgaagactggcagggtgagggacgtcgtatagatctgtctcgtaac
ttccgcagtcgtcagcaggttgtcgatgcggtcaatatgattttccgtcaggtgatgaat
gagaaggttgccgagattcgttatgatgaacgtgctgagttggtggcaggtgcgcagtat
cctcctggggaagaaaaggcctatgcaccagaattctggctaattgaccgggcaggtgct
gagcgaacagcagataatgaagatccagcggaactgcctgcaggatctgctgccgatgaa
gcagaactggaagcggcacgtctggaagcacaggctattgcagctcgtgttcgcgagatg
gtatcaccggatggtcgtccactgatgatttatgataaaagtgtcgatggactgcgccct
gccgaatatcgggatatggttattttgctgcgctcggtatccatatgggcgcctatgatt
gtggaagaactgcagctgcttggtattcctgcttacagtgatttggaacagggctatttt
gaagccgtagaagtggatattatgctgtcgctgctggaaattatcgataacccgcagcag
gatattccacttgcttcggtattgcgttctccaatcgttggactgaacgaagatgagctg
gcagctatccgtttatttggcaaggatatatcttattacgacgcgatgctgctggcgtcc
gagcaagcggaagaacatccgggcagctggaatagcaagcttcttcgttttatggaacag
ctgtccaattggcgtgcccgggcgcgggaggaagagctgggagaactgatctggcggatt
taccgggagaccggttatgtcgattggctgggtggactgcctggcggtatccagcggcaa
aacaatctgcgtattctgtatgatcgtgcccggcagtttgaacgctctacctcatcccga
ggcttgttccgtttcctgcgctttatccgcagactcaaagataatggcggcgacctggga
tccgccgtgtcaggaacgcaggagaatgcgattcgagttatgacaattcacaaaagtaaa
ggattggaattcccggtcgttttcctcgctggcatgtccaaaatgttcaatatgcaggat
ctgaatgcttctttcctgatgcataaggaacttggatttggtcccaaattcgtggatgaa
gatacacgggtcagttatccaacgctgcccaatttggcgattcgccgtcaggcactcaac
gaactgctggcagaagagatgcgcgtactctatgtcgcattgacacgtccaagggacaag
ctgatcatgatcggaaccgtacgtggactggacaagaaaatctcggcctggagccagatt
cagaattcggagcagctggagctgccggactatttactggcacgtgggcgcagctatctg
gattggctcggtctggcgatgatgcgtcatcgttcggcggccatattccgtgaacgaaat
gaagcagcagccggtccgtattccgactgtctggcagctgatccatccgactggcagatt
cgtattatcgacagccgcgagctgcgcgttgccgatgagaatgatgaattgagctatgca
ggtccgcgtgataatgatcccaaatggcaggcactccgggaaaaaagtgaagtgacactg
tctcaaatccgcgaccatttggatacagatacagatacagatacagatacagatacagat
acagatacagatacagatacagatacagatacagatacagatacagatacagataactgg
caaagtatcgtttatgatcgtctatcctggcagtatccttatgagaatgctgtgcacacc
cccgccaagactactgtcagtgagctaaaaagacagctggcgacggaagatgctcctgat
gcagatttatgggaaggcatctggaatctgcagccgctgctgaattcatttgctaatcga
aaggcagaaacgaacgatacagaagcatctctatcttcttcggagccgattgcagctgcc
gataatgatatagcagttgatgccatagctgatagtcagacatccagtctgtacaatgac
ggcacactcaaactgcagcgtcccaaatttatggaaaagcgcggtctgagcggagccgag
cggggaacagcttatcatactatgatgcagcgtatccctcttcaggcgggtccgatcgat
acagcgctagtggatcagatcagagaccaactggtacagctgcagattttgacccaaccg
gaagccaatgcagtgaaaacggcagacattaccgccttttttgccagcgagcttggtcag
cgtcttatccattcagagtggatcaggcgtgaaatgccttttagctatggaatccctgta
aatgaacaaaacgatatcatgcttacccaggggattgtcgattgtctgttccgcgaaggc
gaacaaacgattctgatcgattacaaaaccgatcgtattgcagctcacgaaggtggcctg
gaatctttggaacagcggtatcggcttcagcttgaactatatgcacaggctgttgaagaa
tcacttggacaacctgtaaatgaattgtggctgtacttttttgatggtgcacgggcagta
aggctcaatgccgacaaatag
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