Paenibacillus bovis: AR543_18160
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Entry
AR543_18160 CDS
T04407
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pbv
Paenibacillus bovis
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_18160
Enzymes [BR:
pbv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AR543_18160
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AR543_18160
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
UvrD-helicase
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANF97745
UniProt:
A0A172ZJC4
LinkDB
All DBs
Position
complement(4286378..4289905)
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AA seq
1175 aa
AA seq
DB search
MPLKFMLGRSGSGKTTTVIQRIIDQIKEQPDGPPILLLVPEQASFQAQYALIRTPELRGN
VRAHTYGFRHFAEWILRETGGSARTPIGDEGKKMLLYKLIHAHQPELRLFGASSDQFGFI
GKLSELYTEFKHHALTAEELARYVQQPGAQRSPLLSDKLHDLQRIYQEYEQGLAGLYVDR
DDTLTDLAAAIPQSETLNHVEVWIDGFHSFSPQEYAVIAALMEKAASVTITLTLDRPYDQ
EPPQEMELFHPTALTYRKLAQLAEALDGTALPIIENLSASPDSVPVRFRNSAQLAHLEYG
YRHRKVWREPSADQAQAREQDITIHSTLDRRSEIEAALREMIRLARDKGARWRDMALFVR
TLDDYESMIEPLLQDYNIPYFMDKRQGILHHPLAEFLRSALDIVMYHWRYEDVFRCIKTG
MLVPDDGRVSTEDIDRLENAVLATGIHGSRWTDGRPWRNIPGIHMENEEERTESQRAAAQ
RIEQARDLVTGPLITFEKKIKKARHATEMCIALYQLIEDCNIAGQLEQMSGSAALAGDPL
RAREHVQIYGSIMDLLEQMVDIMGEGELELTTFAGLLETGLSGLRLGIIPPAMDQVLIGS
MDRTRPMDIRYAFVLGVNDGIVPSVFVDDGILNEMERTSMSDDGLALAPGITRRQLDERF
LIYNTLTMASDKLWISYSQTDHEGKGLLPSEVITQVRSLFPFLQHQHHHPSAEQESDRIS
HPATTLPLLIGQLRDWSRGSDMQPAWWHAYNWYTAQSQWQPQLHMLLDSLFYENRGRQLN
EDTSRHLYGSVLRTSVSGMEQFVSCPFAHFAARGLKLRERQEYRLKAPDISKLFYASLTD
LAKDLKSQGRKWGDLSPEECMQAAEAAVDKHVPRLQGEILFSSKRYGYITRKLREIVSRA
SVIIGEQSRRGDFEPWYLELVFGPNGDWPPLRFTLDNGCTMEIVGKIDRVDVAESDNGLL
IRIIDYKSSQTDLKLHEVYYGLALQMLTYLDVLLTHAEDMLGQKASPAGALYFHVHNPLL
QSGNRLTLQQSQQELLKKFKMKGLLLADRDVIGRMDMELDKGYSAILPVAVKTDGGFYSS
SAVASPDQWDELLRNVRQTARDIGTGITDGQTDITPYRMEQEKACTFCSYKSVCQFDESV
KGNAYNILKKPNKNETWELLQNQQSTQKGDHSIDQ
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgccactcaagtttatgctcggtcgttccggaagcggcaaaacgactacagttattcag
cgaattattgatcagatcaaagagcagccagatggtccgcctattttgctgctggtgccg
gagcaggcatcctttcaggcgcagtatgcacttattcgcacacctgagctgcgaggcaat
gtacgggcacatacgtatggtttccgtcattttgccgagtggatacttcgggagaccggc
ggatcggcacgcacgcctatcggagatgaaggcaaaaaaatgctgctgtacaagctgatt
catgcgcatcagccggagctccggttatttggcgcatccagtgatcagtttggatttatc
ggcaaattaagtgaattgtataccgagttcaagcatcatgcgctgactgcagaagagctg
gctcgttatgtacagcagccgggagcgcagcgctcgccactgctgagcgataagctgcat
gatctccagcgtatttaccaggagtatgagcagggactggcaggattatatgtggatcgc
gatgatacactgacagatctggctgcagcgattccgcaatcagagacactgaatcatgta
gaagtatggatcgacggcttccacagcttcagtccgcaggaatatgccgttattgcagca
ctgatggaaaaagctgcatcggtgacgattacactcacactggatcgtccctatgatcag
gaaccgcctcaggaaatggagctgttccatccgaccgcactcacctatcgcaagctggcc
cagctggccgaagcactggacggaactgctctgcctattatcgagaatctgtcggcatct
cctgacagtgtaccggttcggtttcgcaacagtgcccagctggcacatctggaatatggc
tatcgtcaccggaaagtatggcgtgagccgtcggctgatcaggcacaggcacgggagcag
gatattacgatccattccacactggatcgccgttccgaaatagaagcagctctgcgcgag
atgatacgactcgcccgcgacaaaggggcgcgctggcgggacatggcactgttcgttcgt
acactggatgattacgaatcgatgattgagccgctgctgcaggattataatattccttat
tttatggataaaagacaggggattttgcatcatccgctggcagagtttttgcgctcggcg
ctggatattgtcatgtaccactggcgatatgaagatgtattccgctgcatcaaaacaggc
atgcttgttccggatgatggccgcgttagcacggaagatatcgaccgacttgaaaatgca
gtactggcaaccggtattcacggctcccgctggaccgatggacgtccatggcggaatatt
cccggtattcatatggagaatgaagaggaacggacagaaagccagcgtgcagctgcacag
cgcatcgagcaggcacgggatctggttaccggtccgctgattacttttgaaaagaaaatc
aaaaaagcccgtcatgctaccgaaatgtgcatcgccctgtatcagttgatcgaagactgc
aatatcgccggacaactggaacaaatgagcggtagtgctgccctggcaggcgatccgctg
cgtgcacgtgagcatgttcagatctacggcagtattatggatctgctggagcagatggta
gatattatgggagaaggcgaactggagctaaccacatttgccggtctgctggagaccgga
ctgtccggtctgcgtctgggtattattccgccggcgatggatcaggtactgatcggttcg
atggatcgcacccgcccgatggatataaggtatgcatttgtactaggtgtgaatgacggg
attgttccatctgtatttgtggatgacggtattctgaacgagatggagcggacgagtatg
tccgacgatggattagcactggcaccgggtattacacggcgtcagctggacgagcgtttt
cttatttacaatacattaacgatggccagcgacaaactatggatcagttattcgcagacc
gatcacgaaggcaaaggattgctgccgtcggaagtcattacccaggtacgcagtctgttt
ccttttttgcagcatcagcatcatcatccttcggctgagcaagaaagcgaccggatcagt
catccggccactacactgccgctgctgatcggacagctgcgtgactggagcagagggagc
gatatgcagccggcatggtggcatgcctataactggtatacagcacagtcacaatggcag
cctcagctgcatatgctgctggactcactcttttatgaaaatagaggtcgtcagctgaat
gaggatacgagccgtcatctgtatggaagtgtgctgagaacaagtgtctccggtatggag
cagttcgtctcctgtccgtttgcccattttgccgctcgcgggctcaagctgcgtgaacgg
caggaatacaggctcaaggcaccggatatcagcaagttattctatgcttcactaaccgat
ctggccaaggatctcaaaagccagggacgcaaatggggagatctcagtcccgaagaatgt
atgcaagcagccgaagcagctgtcgacaagcatgtaccgcggctgcagggggaaatcctg
ttcagctccaaacgatatggctatattacacgtaaactgcgtgagattgtcagcagagct
tcggtcattatcggagagcagtcgcgtcgtggagactttgaaccatggtatctggaattg
gtatttggtccgaatggagactggccgccgctgcggttcacgctggataatggctgcacg
atggaaattgtgggcaaaattgaccgggtggacgtggccgagagcgataacgggctgctt
atacgcattatcgactacaagtccagtcagaccgatctgaagctgcatgaagtctattat
ggactggcactgcagatgctgacctatctggatgtactgctgacccatgcggaagatatg
ctgggacaaaaagcttcgccagctggcgcgctctatttccatgtgcataatccactgctg
caatccggcaatcgtctgaccctgcagcagtcccagcaggagctgctcaagaaattcaaa
atgaaagggttgctgctcgccgaccgcgatgttattgggcggatggatatggaactggac
aaaggctactcggctattttaccggtagcggtgaaaaccgatggcggtttctacagcagc
tcggcagttgcttccccggatcaatgggatgaactgctgcgcaatgtaagacagactgcc
cgtgatattggaacaggcattaccgatggacagaccgatattacgccataccggatggaa
caggaaaaagcctgtacgttctgctcctacaaatcggtctgccagttcgatgaatcggtc
aaaggcaatgcctataatatactgaaaaaaccaaacaaaaatgaaacttgggagctgctg
caaaatcagcagagcacgcagaaaggagatcattctattgaccagtaa
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integrated database retrieval system
