Paenibacillus bovis: AR543_19745
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Entry
AR543_19745 CDS
T04407
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pbv
Paenibacillus bovis
Pathway
pbv03410
Base excision repair
pbv03430
Mismatch repair
pbv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pbv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AR543_19745
03430 Mismatch repair
AR543_19745
03440 Homologous recombination
AR543_19745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pbv03400
]
AR543_19745
DNA repair and recombination proteins [BR:
pbv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
AR543_19745
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AR543_19745
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
AR543_19745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
ANF98034
UniProt:
A0A172ZK76
LinkDB
All DBs
Position
complement(4680129..4682543)
Genome browser
AA seq
804 aa
AA seq
DB search
MIHSQYHWNVHYPDPAEAQRLSAKLGISELTASLLAGRGYTGEMEAAEFLSGSRSTSHDP
YLLAGMKEAVERIRQALSAGEKIWIYGDYDADGVSSTSLMIQLMRHLNADYDIYIPHRSK
EGYGLHNHAIDQAHAQGVTLIVTVDTGISAVSQIAHAAALGIDVVVTDHHEPPAELPAAC
ALVNPKLEYCTYPFKGLAGVGVAYKLAQALLGKDQVPEEWLEIVSIGTVADLMPLEDENR
MMVRTGVERMKHSAFAGVRALMNIAAIDPAQMSATHIAFAMAPRINASGRMEHAKRAVEL
LTTTNQAEADQISFELDQLNKERQDLVNRMVQEAIIMLEAEKDMNNGSIPHVIVVAGEGW
NPGVVGIVASKLLDRYYRPTIVLGTDPQTGMSKGSARSIPGYDIYKALLDCEDVMDHFGG
HPSAAGMSLHRDQLNEFRRRLNERAAGMLTEEDLVPQTAADHECTLDQLTLSAIEELDQL
APFGMSNPLPRIVLRGVTVTQAKAIGKTLDHLRLVVEQDGTMMEGIAFGKGELAELLSEG
DRIDILAETSINEWRGNRKPQLMVQDLAVPGLQVWDRRSSGQWEQHLKTIRQKWSRYMGV
EGGQLGVLCSENRVETLKTQLSDVSLWGYDRKVDIAACNHVSTQYGAEAIRTLCLLSLPA
HIEQLDTIFEQFTSLENIVLLHDRPQQQERLQIPDRDRFKLIYGWLVKSSETIAEEAKLV
PYLSQKTSSSVRMVQMMLEVFEELEFIIRRDGQVMLNNAPVKRPLDSSQLYRELGELAEM
EYMLCESDLPQLTSWMISRMQGAS
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgattcattcacaatatcactggaatgtacattatcccgatccggctgaagcccagagg
ctcagtgcaaagctggggatctcggagctaacggcttcgctgctggctggcagaggatat
acgggagaaatggaagcggccgaattcctgtcgggcagccgcagtacatcgcatgatcct
tatctgctggccggtatgaaggaagcggtagagcggatacgccaggctttgtcggcaggc
gagaagatatggatctatggcgattatgatgctgacggtgtatccagtacatcactgatg
attcagttgatgcgtcatctgaacgccgattacgatatttatattccccatcgctccaaa
gagggctatggtctgcataaccatgcgattgatcaggcacatgcacagggagtgacgctg
attgttacggtcgacaccgggatcagtgcagtgtcccagattgcccatgctgcagcgctc
ggaatcgatgtggtcgtaaccgatcatcatgagccgccggcagagctgcctgctgcctgt
gcgctcgtgaatccgaagcttgaatactgcacgtatccttttaaaggattggctggtgta
ggtgtggcctacaagctggcacaggcactgctcggcaaggaccaggtaccggaagagtgg
ctggagatcgtctcgatcggtacagtggccgatttgatgccgctggaagatgagaaccgg
atgatggtgcgtacgggtgtagagcggatgaagcacagtgcatttgccggtgtacgcgca
ctgatgaatattgcagcgatcgatccggcgcagatgtcggcgacccatattgcttttgct
atggcaccgcgcattaatgccagtggacgcatggagcatgccaaacgcgcagtggagctg
ctcacgactaccaaccaggcagaagccgatcagatctcttttgaactggatcagctgaat
aaagaacggcaggatctggtaaaccggatggtacaggaggccattatcatgctggaagcc
gagaaagacatgaacaatggcagcattccgcatgtaattgtcgtagctggcgaaggctgg
aatcccggggttgtcggtatagtggcatccaaactgctagatcgttattaccggcctacg
attgtgctcggtaccgacccgcagacaggcatgagtaaaggctccgcacgttctatcccc
ggctatgatatctataaggcactgctggattgcgaggatgtgatggatcattttggcggt
catccatcggcagcaggtatgagtctgcaccgggatcagctgaacgaattccggcggcgg
ctgaatgaacgggcagcaggcatgctgaccgaagaagatctggttccccagacagcagcg
gatcatgaatgcacgctggatcaactcaccctgtctgcgatcgaggagctggatcagctg
gctccctttggcatgtccaatcctttgccgcgtattgttctgcgcggtgtgaccgtgacc
caggccaaagccatcggcaagacgctggatcatctgcggctcgttgtagagcaggatgga
accatgatggaaggcattgcttttggcaaaggcgaactggctgagctgctgtccgagggt
gaccggattgatatactggccgagaccagcattaacgaatggcgtggcaatcgcaagccg
cagctgatggtacaggatctggctgtgcctggacttcaggtctgggatcggcgcagttcc
ggtcagtgggagcagcatctgaagaccatccggcagaaatggtcgcgttatatgggcgtg
gaaggtggccagctgggtgtgctgtgcagcgaaaatcgggtggaaactttaaaaacccaa
ttgtcggatgtatccctttggggttatgatagaaaagttgatatcgcagcttgcaatcat
gtctccacacagtatggggcagaagctatacgcacattatgtctgttatcattaccggcg
catatcgagcagctggatactattttcgaacagttcacttctcttgaaaatatcgtcctg
cttcatgatcggccgcagcagcaggaacgtctgcagatacccgaccgggaccgttttaaa
ctgatatacgggtggcttgtcaaatccagcgagacgatcgcggaggaagcgaagctggtt
ccctatctaagtcaaaaaacctccagctcggtaagaatggtacagatgatgctggaagtg
ttcgaggaactggagtttattatccgtcgggatggacaggttatgctgaataacgctccg
gtaaaacgtccgctcgacagctcacagctgtaccgggaacttggcgaactggctgaaatg
gaatatatgttatgtgaaagtgatctgccgcaattaacttcatggatgatttcccgcatg
caaggcgcatcataa
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integrated database retrieval system
