Pseudoalteromonas sp. Bsw20308: D172_000160
Help
Entry
D172_000160 CDS
T04175
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pbw03032
]
D172_000160 (gyrB)
03400 DNA repair and recombination proteins [BR:
pbw03400
]
D172_000160 (gyrB)
Enzymes [BR:
pbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
D172_000160 (gyrB)
DNA replication proteins [BR:
pbw03032
]
Prokaryotic type
DNA Topoisomerases
D172_000160 (gyrB)
DNA repair and recombination proteins [BR:
pbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
D172_000160 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALQ06598
LinkDB
All DBs
Position
complement(34050..36476)
Genome browser
AA seq
808 aa
AA seq
DB search
MSENYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCDDIY
VTIHLDGSVSVRDNGRGIPTSIHEEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLKLTVRREGKLHEQFYTMGVPDAPLAVIGDSETTGTELRFWPSGETFTNLD
FHYEILAKRLRELSFLNSGVSIILNDEREENKSDHFKYEGGIQAFVEYLNRNKTPIHKGV
FHFTHEREEDGISVEVSMQWNDAYQENIYCFTNNIPQRDGGTHLAGFRSALTRTLNNYME
KEGFNKKAKTTSNATGDDAREGLTAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQAMAEK
FTEFLLENPVDAKIVVGKIIDASRAREAARKAREMTRRKGAMDLAGLPGKLADCQEKDPA
QSELYIVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGC
GIGRDEYNPEKLRYHRIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGYIYIAQPPLYK
VKKGKQERYIKDDPALVEYLTSLALNNAALYTSANASALEGEALETIVHDYQNTVKVIER
LKRKYPSTVMERLIYQSELKKEDLSDEAKVIEWTKELVDDLIARDEDATIFNAATEHDTE
RNLYYPVVNIRQHGVDKSHVLSYDFITSRDYQRIAVTGVNIANIITEGAYIQRGEKTLPV
DNFVDALEWLIAESKRGLYIQRYKGLGEMNPSQLWETTMDPSARRMLQVTIEDAVGADQL
FATLMGDQVEPRREFIETNALRVVNLDV
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagaattatgactcgtcgagtattaaagtacttaaaggattagacgcagtaaga
aagcgtcctggaatgtatattggggacaccgatgatggcacaggcttacaccacatggtg
tttgaggtcgttgataactctatcgatgaagccctagcaggtcattgtgatgatatttat
gtaactattcacttagacggttctgtctcagtacgagataacggccgtggtatcccaact
tctatccatgaagaagaaggcgtatcagcagccgaagttattatgacggtacttcatgct
ggtggtaagtttgatgataactcttataaagtatcgggtggcttacacggtgttggtgtt
tctgttgtaaatgcactttcagaaaaactaaaacttaccgttcgccgtgaaggtaaacta
cacgagcagttttacactatgggtgttccagatgcacctttagctgttattggtgactca
gaaacgactggtacagaactgcgtttttggccaagtggtgaaacattcacaaacttagat
tttcattacgaaattttagctaagcgtttacgcgagctttcattcctaaattcaggtgtg
agcatcattttaaatgatgaacgtgaagaaaataaatctgaccactttaaatacgaaggc
ggtattcaagctttcgtagaatacttaaaccgtaataaaacacctatacataaaggtgta
ttccattttactcatgaacgtgaagaagatggtattagcgttgaagtatcaatgcagtgg
aatgatgcataccaagaaaacatttactgttttacaaataatattccacaacgtgatggt
ggtactcatttagccggttttagatctgcgctaacacgtacgcttaacaactacatggaa
aaagaaggctttaacaaaaaagctaaaacaaccagtaatgcgaccggtgatgatgcccgc
gaaggtttaacggctgttgttagtgttaaagttcctgatcctaagttctcatcgcaaaca
aaagataagctcgtttcaagcgaagttaaatctgcggttgagcaagcaatggctgaaaag
ttcactgagtttttattagaaaacccagtagatgccaaaattgttgttggtaaaatcatt
gatgcatctcgtgcacgtgaagcggcgcgtaaagcccgtgaaatgacacgacgtaaaggt
gcaatggacttagcaggcttgccgggtaagctagctgattgccaagaaaaagacccagcc
caatctgaactatatatagtggaaggggactctgctggcggatcagccaagcagggacgt
aaccgtaaaaaccaagctattcttccgcttaagggtaaaatcttaaacgtagaaaaagca
cgttttgacaagatgttatcttcgcaagaagtagcaacgctaattactgcattaggttgt
ggtattggacgtgacgaatataaccctgaaaaattacgttaccatcgtatcattatcatg
accgatgcggacgtggatggttctcacattcgtacgttactactaacattcttctatcgt
caaatgcctgaaattgtagaacgcggctatatttatattgctcagccaccactttacaaa
gtgaagaagggtaagcaagagcgttatattaaagatgatccagcattagttgaatactta
acatcgcttgcgcttaataatgcggctttatatacaagtgcaaatgcgtcggcgcttgaa
ggtgaagcactagagacaatagttcatgattaccaaaacacagttaaagtaatcgaacgc
ttaaaacgtaaatacccaagtacggtaatggagcgtttaatttatcaaagcgaactgaaa
aaagaagacctttcagatgaagctaaagtaattgagtggactaaagagctagtagacgac
ctaatagcacgagatgaagatgcgactatttttaatgctgcaacagagcatgatacagag
cgtaatttatattatccggttgtgaatattcgtcagcatggtgttgataaatcgcatgtg
ttgagctatgactttattacctcacgcgattaccaacgtattgctgtgactggtgttaac
atcgcaaatatcattacagaaggcgcttatattcaacgtggagagaaaacacttcctgtt
gataactttgtggatgctttagaatggttgatcgcagaatctaaacgtggtctatatatt
cagcgttataaaggattgggcgaaatgaacccaagccagctttgggaaaccacaatggat
cctagtgctcgtcgtatgttacaagtgacgatcgaagatgccgtaggcgcggatcaatta
tttgctaccttaatgggtgaccaagtagagcctcgtcgtgagtttattgaaactaacgca
ttgcgcgtagttaacttagacgtataa
DBGET
integrated database retrieval system
