Pseudoalteromonas sp. Bsw20308: D172_001225
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Entry
D172_001225 CDS
T04175
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pbw
Pseudoalteromonas sp. Bsw20308
Pathway
pbw00300
Lysine biosynthesis
pbw00470
D-Amino acid metabolism
pbw01100
Metabolic pathways
pbw01110
Biosynthesis of secondary metabolites
pbw01120
Microbial metabolism in diverse environments
pbw01230
Biosynthesis of amino acids
Module
pbw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pbw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
D172_001225
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
D172_001225
Enzymes [BR:
pbw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
D172_001225
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ALQ06786
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Position
complement(287343..288548)
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AA seq
401 aa
AA seq
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MSFLSTPIKTAVNTITQQLDTPFFVYDLDQLNTHLARLVAQTDVKLWYAVKANPLSKIIQ
SLDNAGFNFDVASKGELEQVLAQGISSQRVLNTGPAKSPKQIKHFIERGVRIFVAESLNQ
VRWLNQQAQLQNTQLQVLLRVQLRWPEGEKNPLGGDSLTPFGLGCDEWQALNVTDYPALK
FDGLHIFQWGNMLSTQKLSDLWSQMIAPLSQLASDLNISLKILDLGGGLGIPYTQNEATL
DWDDLIAALAKIKNDAGVEELWMELGRYAVGECGHYANPIIERKQNYNQQQVILSGGINH
LLRPAVTSQDFPAALLRESSAKTQAVTLYGPLCTALDCLGEHNLPSDLNEHDWLVFSQCG
AYGFTESMPYFLCHELAGEYTLQNGKLTCVRQAENASHYLR
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgagctttttgagcacgcctatcaaaaccgctgtaaatacaattacacaacaacttgat
acacctttttttgtttacgacctagatcaactaaacacgcatcttgcacgtttagttgcg
caaaccgatgtaaaactgtggtacgcggtaaaagcaaatccactgtctaaaattattcaa
agcttagacaacgctggttttaattttgacgtagcaagtaaaggtgagcttgagcaagta
ctcgcacaaggtattagctcacagcgcgtgctcaacacagggcctgcaaaaagccctaaa
caaattaaacactttattgagcgcggagtacgtatattcgtagccgaaagcctcaatcaa
gtacgttggttaaaccaacaagcgcaactacaaaatacgcagttacaagtattactgcga
gtgcaattacgctggcctgaaggtgaaaaaaatccactgggcggcgacagccttacgcca
tttggtttgggttgtgatgagtggcaagcactcaatgtaaccgactaccctgcacttaag
tttgacggcttacatatttttcagtggggcaacatgcttagcacgcaaaaactaagcgac
ttgtggtcacaaatgattgcacctcttagccaacttgccagcgatttaaatattagcctt
aaaattctcgatttaggtggcggtttaggtattccttatacacaaaatgaagcaacgctt
gattgggatgacttaatagctgcgctcgctaaaattaaaaatgatgcgggtgtagaagaa
ttatggatggaacttggtcgttatgccgttggcgaatgtggtcattacgcaaacccaata
atagagcgcaaacaaaactataatcaacagcaagtcattttaagcggcggtataaaccac
ttattacgccctgctgttaccagccaagattttcctgctgcgttactgcgtgaatccagt
gctaaaactcaagcggtcactttatacggcccactttgtacagcgcttgattgcttgggt
gaacataacttaccaagcgatttaaatgagcacgactggctagtgtttagccaatgcggt
gcttacggctttaccgaaagtatgccgtattttttatgccatgagctcgccggcgagtac
acattgcaaaacggtaaacttacctgtgttcgccaagccgaaaatgccagccactactta
aggtaa
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